Pseudoalteromonas sp. Bsw20308: D172_001870
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Entry
D172_001870 CDS
T04175
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbw01011
]
D172_001870
Enzymes [BR:
pbw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D172_001870
Peptidoglycan biosynthesis and degradation proteins [BR:
pbw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D172_001870
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
ALQ09672
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All DBs
Position
complement(446382..447857)
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AA seq
491 aa
AA seq
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MRSLSLCFLVLFLFGCETTESEIQETPKIFTHFEPKHTFLDKSDQRIIEDAQVKPQNTVL
LHKKVNIKKPSPKATDLWVHIAENLHFKIDQNRALKQRINWYLKQPNYLRAVNKRAAPYL
YHIVKKIEQKQLPMELALLPFVESDFRPTIASSQQAVGVWQLVGATAHHFGVKSDQWYDG
RQDVLASTDAALDYLSYLHKRFDGNWLHALAAYNSGEGRVKRAIEKNKKRGKSTDYWSLS
LPKETADYVPKLLALSYLVKHPQKGIKRPKLAYKPFTTQMNIGQQFDFSVIAKLSGIGSK
QLHAINQGYLKNQSSPNGPHTLLLPIGQEALLKSQFFKSNFAGEYIVKQNDTLYGIAKRF
SMSVKALKQLNNKNNNLIGVGEKLLVGQPKTLPSTLTVDYKISPYLEHQEIAIPTIEIDY
EVKSGDSLWSISQLYDVPHSDLAKWNKLSASSILKPGTQLVLFIPQAEKQKAAPIKKDLL
LDLQKTLNQPR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcttgtctctctgttttttagttttatttctattcggttgtgaaacaactgaa
tcagaaattcaagaaacgccaaaaatatttactcactttgagccaaaacacactttttta
gacaaatcggatcaacgcataattgaagatgctcaagtaaagcctcagaacacagtatta
ctacataaaaaagtaaacattaaaaagccatctcccaaagcaactgacttatgggttcac
attgccgagaacctgcattttaaaattgatcaaaaccgagctttaaagcaacgtataaat
tggtatttaaagcaacccaattacttacgtgctgtaaacaaacgcgcagcgccgtacctg
tatcacatcgtaaaaaaaattgagcaaaagcaactacctatggagctcgctttactacca
tttgtagaaagcgattttagaccaacgatagcctcatcacagcaagctgttggtgtttgg
cagttagttggcgcaacggcgcatcactttggtgttaagtcagaccaatggtacgacggc
cgccaagacgtacttgcttcaaccgatgctgcacttgattacttaagttacttacataaa
cgctttgatggtaattggctacacgctttggccgcttataacagtggtgagggccgtgtt
aaacgcgcaatcgaaaaaaacaaaaagcgcggtaaaagcaccgattactggtcgctaagc
ctaccaaaagaaaccgctgactacgtccccaagttactcgctttaagctatttagttaaa
cacccacaaaaaggcattaagcgcccaaagcttgcatataagccatttacaacacagatg
aatataggccagcagtttgacttttcagttattgctaagctctctggtataggctccaag
cagttacatgcaatcaatcaggggtacttaaaaaatcaaagctcacctaacgggccgcac
actttactgcttcctatagggcaagaggcattattaaaaagtcagttttttaaatcaaac
tttgctggagagtacatcgttaaacaaaacgacacgctttatggtatcgctaagcgtttt
agtatgtcggtaaaagctctaaaacaacttaataataaaaataataatttaatcggcgtt
ggagaaaagttattagttggacaacctaaaactctgccaagcacattaactgttgattac
aaaattagcccttatttagagcaccaagagattgcgattcccaccattgaaatagattac
gaagttaagtcaggcgatagcctttggagtataagtcagctttatgatgtccctcatagc
gacttggcaaaatggaataagctctctgcatcaagcattttaaagccaggcactcaatta
gtgctgtttataccccaggctgaaaagcaaaaagcagcaccaataaaaaaagatttactg
ctagatttacaaaaaacactaaatcagccacgttaa
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