Pseudoalteromonas sp. Bsw20308: D172_002150
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Entry
D172_002150 CDS
T04175
Symbol
fis
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbw03000
]
D172_002150 (fis)
03036 Chromosome and associated proteins [BR:
pbw03036
]
D172_002150 (fis)
03400 DNA repair and recombination proteins [BR:
pbw03400
]
D172_002150 (fis)
Transcription factors [BR:
pbw03000
]
Prokaryotic type
Helix-turn-helix
Other families
D172_002150 (fis)
Chromosome and associated proteins [BR:
pbw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D172_002150 (fis)
DNA repair and recombination proteins [BR:
pbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
D172_002150 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
HetZ
HTH_psq
HTH_30
Xre-like-HTH
Phage_NinH
RAD51D_N
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ALQ06959
LinkDB
All DBs
Position
complement(512812..513102)
Genome browser
AA seq
96 aa
AA seq
DB search
MFEQNVTSPFITNPHVQSHEKPQPLRDAVKKAVHHYLKQLNGQDVQDVYDLVLSELEAPL
LEEVMTYTRGNQTRAAILLGINRGTLRKKLKKYGMN
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaacgtgacttctccatttatcactaaccctcatgttcagtcacacgag
aaaccgcagccattgcgtgatgcagtaaaaaaagctgttcaccactatttaaagcagctt
aacggtcaagatgtgcaagacgtttacgaccttgttctttcagagctagaagcgccatta
cttgaagaagtgatgacatatacacgtggtaaccaaactcgtgcagcaattttactaggt
atcaaccgtggtactttacgtaaaaagcttaaaaaatacggcatgaactaa
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