Pseudoalteromonas sp. Bsw20308: D172_002345
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Entry
D172_002345 CDS
T04175
Symbol
pdhR
Name
(GenBank) transcriptional regulator PdhR
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbw03000
]
D172_002345 (pdhR)
Transcription factors [BR:
pbw03000
]
Prokaryotic type
Helix-turn-helix
GntR family
D172_002345 (pdhR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR_2
MarR
TrmB
HTH_41
HTH_11
HTH_24
HTH_DeoR
HTH_Crp_2
Fe_dep_repress
HTH_36
Rrf2
HTH_20
HTH_28
HTH_IclR
B-block_TFIIIC
Motif
Other DBs
NCBI-ProteinID:
ALQ06996
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Position
553235..553984
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AA seq
249 aa
AA seq
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MSLKIKAAKLSDVILQQLENMILEGSLAPGEKLPPERELAKQFEVSRPSLREAIQKLEAK
GLVTRRQGGGTFVKNQLEEGLTDPLFDLISKHPESQFDLLEFRHALEGIAAYYAALRGTS
NDFSKVKQSFDEIALVNDDLQQKAKAINAFHFSVAEASHNVVLLHLVRGMKALLEQNVLQ
NLTVLLKKSDISSQLAQHRRLLMDAVIDGNPEQARLASNAHLAFIEEALLEAGKEHSRIE
RSLRRTKQN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaagattaaagcagcaaaattatctgatgttattttacagcaacttgagaac
atgattcttgaaggctcgttagcaccaggtgaaaagttgccaccagagcgtgaactagca
aagcaatttgaagtgtctcgcccgtcactgcgagaggcaattcaaaagttagaagcgaaa
ggtttagttacgcgtcgccaaggtggcggcacgtttgtaaaaaatcagctcgaagaaggg
cttactgatccactttttgatttgattagtaaacaccctgagtcgcagtttgatttactt
gaatttcgtcatgcattagaagggattgctgcttactacgcagcactgcgcgggaccagc
aacgattttagcaaagtaaagcaaagctttgatgaaattgccttagttaatgatgattta
cagcaaaaagcaaaagcaattaatgcatttcactttagtgtggctgaagcttcgcataat
gtcgtgttattgcatttagttagaggtatgaaagcgctgcttgagcaaaatgtactgcaa
aatttaactgttctattaaaaaagtcagatattagcagtcaattagcccaacacaggcgt
ttattaatggatgccgttattgacggtaatccagaacaagcccgtttagcaagtaatgcg
cacttagcatttatagaagaagcattgcttgaagcaggcaaagaacattcgcgaattgaa
cgtagtttaagacgcactaaacaaaattaa
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