Pseudoalteromonas sp. Bsw20308: D172_002950
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Entry
D172_002950 CDS
T04175
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbw03009
]
D172_002950
Enzymes [BR:
pbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D172_002950
Ribosome biogenesis [BR:
pbw03009
]
Prokaryotic type
rRNA helicases
D172_002950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Helicase_RecD
UvrD-helicase
AAA_22
SAM_3
SNF2-rel_dom
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
ALQ07112
LinkDB
All DBs
Position
complement(693923..695149)
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AA seq
408 aa
AA seq
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MQFSEFDLDNKLLDAINKMGYETPTSIQQQAIPEALQGRDILASAPTGTGKTAAFLIPAI
QYLLDFPRRDPGFARVLVMTPTRELAYQIHEQCELLAKRTHLKIGVVTGGINYGTHKEIF
EKNNDILIATPGRLMEYLETENFHAEHVEMLIIDEADRMLDMGFKKEMSRICDEAKNRRQ
CFLFSATLEGDSVERFAEKTLNDPALLEAESSRKEKAKIHQWVHLADDYHHKLELLVNTL
KNPDVTKAIVFVKTRERLETLIGELTTNDVKAAWLRGEMPQDKRMKAMENFHSGKTSILV
ATDVAARGIDVSDISHVINFDMPRTADVYVHRIGRTGRAGKKGIAISLVEAHDIGILYKV
ERYVEQKLKRRVIRGVEPQHKEAKPPAKKRKDPVKMKAKKKAKVKKKK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaatttgatcttgataacaagctactcgatgccattaataaaatgggc
tacgagacgccaaccagcattcaacaacaagctattcctgaagcactacaggggcgcgat
attttagcatctgcgcctactggtacaggtaaaacagcggcatttttaattccggctatt
cagtacttactggatttcccacgtcgtgaccctggttttgcgcgcgtcctcgttatgacc
ccgactcgtgagttggcttatcaaattcatgaacaatgtgaactgctagctaaacgcaca
cacctaaaaattggtgtagtaacaggcggtattaactacggcacgcataaagaaattttc
gaaaaaaataacgatattttaatcgccacaccaggtcgattaatggaatacctagaaacc
gaaaactttcatgctgaacatgtagaaatgcttattattgatgaagcagatcgcatgtta
gatatgggtttcaaaaaagaaatgagccgtatttgtgacgaagctaaaaatcgtcgccaa
tgttttttattctcagcaacacttgaaggtgacagcgtagaaaggtttgctgaaaaaaca
ttaaacgacccagctctattagaagccgaatcgtcacgtaaagaaaaagcaaaaattcat
cagtgggtacatttagccgacgattaccatcataagcttgaattgttagttaacacgcta
aaaaatcctgacgtgactaaagcaattgtgtttgttaaaactcgcgaacgcttagaaaca
ttgattggtgaacttacaactaatgatgtaaaagcagcgtggttacgcggcgaaatgcca
caagacaaacgtatgaaagccatggaaaacttccacagtggtaaaacaagcatattagtt
gctaccgacgtagctgcacgtggtattgacgtatctgacattagtcacgttattaacttt
gatatgccgcgcactgccgacgtatatgtacaccgtattggtcgtactggccgtgctggt
aaaaaaggcatagcaatatcactagttgaagcacacgatattggtattttatataaagta
gagcgctacgttgagcaaaagttaaaacgccgtgtaattagaggtgttgagccacagcat
aaagaagctaagccaccggctaaaaagcgtaaagatccagtaaaaatgaaagccaagaaa
aaggccaaggttaaaaagaagaagtaa
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