Pseudoalteromonas sp. Bsw20308: D172_003765
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Entry
D172_003765 CDS
T04175
Name
(GenBank) ligand-gated channel protein
KO
K16091
Fe(3+) dicitrate transport protein
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbw02000
]
D172_003765
Transporters [BR:
pbw02000
]
Other transporters
Pores ion channels [TC:
1
]
D172_003765
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Med26_C
Motif
Other DBs
NCBI-ProteinID:
ALQ07250
LinkDB
All DBs
Position
complement(876990..879146)
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AA seq
718 aa
AA seq
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MNPKFLVSTLATAVALSFSATAIAKDTSNKEQRFEQITVIGSQQAINDIPGSATFISEEE
LQKFQFTDISRVLASVPGVYVQEEDGYGLRPNIGMRGTGTGRNDKISVMEDGVLVAPAPY
SAPSAYYFPTMGRMESIEVLKGAASVKYGPRTTGGVLNLLSRSLPTEPNSSKGMVDAALG
SDGYYKGHAYFGKEKNNTAGLIEVFTYGADGFKELPVGNDNTGFEKTDLLLKFGHTFGQN
DAHNLELKIKYSDETSDETYMGLTDEDYKQSPYRRYAASQNDEMNTRHNAYQLNYAYRFG
DGYEFLATAYLNDFHRNWYKASKVSESYLEQYSEFEANPTSEGIEGIAVKANNRDYQAKG
IQSELHIPAGDHYITVGVRYHEDEMDRFQWEDKYTLNQDLSLTLTEQGVPGSDSNRVDSA
EASTLFIQDEWTIDALVISAGLRYEDITITREEWSKSDPTRSNGLTKDVSNDTEILVPSL
GATYTLNENVTLLAGIQKGYAPAAPGNADQEEEESVNIEFGSRFNMDSFSGEIIAFYSDY
DNMHGNCTAAVGCSDDNIGDQYNYGEVEVAGFEFSAARTFATDTAMFPVKLTYTYTDSEF
KNDFDSEIWGAVEKGDAMPYVPENQVALSLGAEFSAFVVNSQIRYVSDAHANLTESGLNA
IDSRVVWDLAAKYLIDENQKVYLSVDNLFDKTYVANRSNGGIQPGKPRTVQMGYTYSF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctaaatttttagtatctaccctagcaactgcggttgctttgtcttttagcgct
actgcaatagcaaaagacaccagcaataaagaacaacgctttgaacaaattaccgttatt
ggctctcagcaggcaattaacgatattcctggttcggctacgtttatttctgaagaagag
cttcaaaaattccagtttaccgatatttctcgcgttttagcatctgttccaggcgtttac
gtgcaagaagaagatggctacggccttcgtcctaatattggtatgcgcggtacaggtact
ggccgtaacgataaaatatcagtaatggaagacggtgtgttagttgcaccagcgccatat
tcggcaccttctgcttactacttccctactatgggtcgtatggaatctattgaagtatta
aaaggcgcagcctcagttaagtacggcccgcgtactacgggtggtgttttaaacttactt
tctcgcagcttacccactgagccaaatagctcaaaaggtatggtagatgcagcccttggt
agcgacggttactacaaaggccacgcttactttggtaaagaaaaaaataacacagcaggt
ttaattgaagtatttacttacggcgcagatggctttaaagagctgccagtaggtaatgac
aacaccggttttgaaaaaacagatttactattaaagtttggccacacgtttggtcaaaac
gatgcgcataatcttgagctaaaaattaagtactctgacgaaacatcagacgaaacatac
atgggcttaactgacgaagattataaacagagtccttaccgtcgttatgctgcatcgcaa
aacgatgaaatgaatacgcgccacaacgcatatcaacttaactacgcgtaccgttttggt
gatggctatgagtttttagcaaccgcttacttaaacgattttcatcgcaactggtacaaa
gccagcaaagtaagcgaaagctaccttgagcaatacagcgaatttgaagcaaacccgaca
agcgaaggcattgaaggtattgctgttaaagctaataatcgcgattaccaagctaagggg
attcagtctgaattacatattccggcaggcgatcattacatcactgttggtgtgcgttac
cacgaagacgaaatggatcgttttcagtgggaagacaaatacacacttaatcaagaccta
agcttaacgcttacagagcaaggcgttccgggctctgatagcaaccgcgtagatagtgcc
gaagcaagcaccttgtttattcaagacgagtggacaattgatgcattagtaataagtgct
ggtcttcgttatgaagacattactattacgcgtgaagagtggtctaaatcagatccaacg
cgcagcaacggtttaactaaagatgtgtcgaacgataccgaaattttagttccgtcgtta
ggtgctacttacacgcttaacgaaaacgtaacgctacttgcgggcattcaaaaaggttat
gcgccagcagcacctggtaatgcagaccaagaagaagaagaaagcgtaaacattgagttt
ggctctcgcttcaacatggatagctttagtggtgaaataattgccttttattctgactac
gacaacatgcacggtaactgtactgcagcggttggttgtagcgacgacaacattggcgac
caatacaactacggtgaagtagaagtagcaggctttgaatttagtgcagcacgtacgttt
gcaactgatacagctatgttcccagttaaattaacatacacctacacagactctgagttt
aaaaacgattttgattcagaaatttggggcgcggtagaaaaaggcgatgcaatgccttac
gtaccagaaaaccaagtagcgttatcgttaggtgcagagttttctgcgtttgtagttaac
agccaaatacgttacgtatctgatgcgcatgctaacttaactgagtcgggcttaaacgca
attgatagccgcgtagtatgggatttagccgctaaatacttaatcgatgaaaatcaaaaa
gtatacctaagcgttgataacttgtttgataaaacatacgttgctaaccgttcaaacggt
ggcattcagccaggtaagccgcgtactgtacagatgggctacacttactcattctaa
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