Pseudoalteromonas sp. Bsw20308: D172_004065
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Entry
D172_004065 CDS
T04175
Name
(GenBank) AraC family transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbw03000
]
D172_004065
Transcription factors [BR:
pbw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D172_004065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
PI_PP_I
DUF5395
Motif
Other DBs
NCBI-ProteinID:
ALQ07308
LinkDB
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Position
942420..943214
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AA seq
264 aa
AA seq
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MFDAIGWDDIKNFETMAQPIIAKIEHAHASHEIPLHTHPKGQLILALHGYVTCEVSAKMW
MVPTHSAIWIPAQKVHSNRASDNAQLCHLFIDSSKNGMPLNTCTLAITPLVKELMCELAG
HNQHYTLNSKTARVAQVLFDQLIEMPVQPLDFVLSKNEVIQTMSDQLINMPNNRKTLPQW
AKQFALTERTLARLIKKETGMTFGKWRTQLHIITALKALSDKQSVQQVSELLGYESVSAF
ITMFKKVMKKSPMKYMSDLNQLSP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcaattggctgggacgatattaaaaattttgaaactatggcgcagcctata
atagccaaaatagagcacgcccatgccagtcacgaaataccactacatacccatcctaaa
gggcaattaattttagcgctacatggttatgtaacgtgtgaagtgtcggcaaaaatgtgg
atggtgcctacgcacagtgcaatttggatcccagcacaaaaggtgcatagtaatagggcg
tctgataacgcgcagctttgtcatttatttattgatagtagtaaaaacggtatgccgtta
aatacctgcacgttagccattacgccgctggttaaagagctaatgtgtgagttggctggg
cataatcagcactatactttaaatagtaaaacagcacgtgtagcgcaggtgttatttgat
caacttattgaaatgcccgtacaaccacttgattttgtattatctaaaaatgaggtaatt
caaactatgagcgatcagcttataaatatgccaaacaaccgaaaaacactaccacaatgg
gctaagcagtttgcattaactgagcgcacattagcgcggttaattaaaaaagaaacaggc
atgacatttggaaaatggcgtacgcaattgcatataattacagccttaaaagcgctttct
gataagcaaagtgtgcagcaggtgtcggagttattagggtatgagtcggtgagtgcattt
attactatgtttaaaaaggtaatgaaaaagtcgcccatgaaatacatgagcgacttaaat
cagcttagcccttaa
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