Pseudoalteromonas sp. Bsw20308: D172_005250
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Entry
D172_005250 CDS
T04175
Name
(GenBank) transcriptional regulator
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbw03000
]
D172_005250
Transcription factors [BR:
pbw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D172_005250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_30
HTH_24
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ALQ07528
LinkDB
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Position
1223174..1224097
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AA seq
307 aa
AA seq
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MKVSFEQLKSMVVFAQIVEQGSLTAAAKQLGLTRAVASYHLKKLETQLEITLLNRSTRTM
ALTEAGIAYYERCRIITEQANAANQQIENIKSEPQGLLKISCPVNVGMQLIVPAINTFKR
QYPKIKIDLQLTDDVIDIIKNGFDFAIRGVALSDSNLQATKLTTMSTCICGAPEYFAHFG
KPKTPLELAEHQWVVYQLGSKTLTLQKDGKKHDITMQGGLSTNNAAARTAFVEAGHGIGR
IPLYDAWPKVQAGLLEIILDDYKSKDIELYGVFPPGAAGSKKLRLFIDYLKAYFVKQHTA
LGMLKGV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgtcgtttgagcagttaaaaagtatggtggtatttgcacaaattgtagagcag
ggtagcttaaccgctgctgctaaacagctagggcttacgcgagccgtggcaagttatcat
ttaaaaaaattagaaacccaacttgaaatcactttactaaatcgttcaacccgcaccatg
gcgctcactgaagccggcattgcttattatgagcgttgtagaataattaccgaacaagcc
aatgccgctaatcaacaaatagaaaatataaaaagtgagccacaaggtttgcttaaaatt
agttgccccgtaaatgtaggaatgcaattaattgtacctgcaataaatacctttaaacgg
caataccctaaaattaaaattgatttacaacttacggatgacgttatcgatattattaaa
aatgggtttgattttgcaattaggggtgtggcgcttagtgactccaacttgcaggcaacc
aagctgactacaatgagcacctgtatttgtggcgcgccggaatactttgcacattttgga
aaacctaaaacgcccttagagctagcagagcaccaatgggtcgtttaccagctcgggagt
aaaacattaacacttcaaaaagatggcaaaaaacacgatattacaatgcaaggcgggcta
agtactaataacgcagccgcacgtactgcctttgtagaagcggggcatggcattggccgt
attccgctttacgatgcgtggccaaaagtacaagctgggttgcttgaaataatattagat
gattataaaagcaaagatattgaactgtacggagtatttccgccaggggctgcgggatct
aaaaaactacgattatttattgattacttaaaagcctactttgtaaaacagcataccgct
ttaggtatgctgaaaggcgtttaa
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