Pseudoalteromonas sp. Bsw20308: D172_006030
Help
Entry
D172_006030 CDS
T04175
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbw03400
]
D172_006030
DNA repair and recombination proteins [BR:
pbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
D172_006030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
ERCC3_RAD25_C
AAA
SLFN-g3_helicase
AAA_22
ATPase_2
Zn_ribbon_3
AAA_30
Zn_Ribbon_1
UPF0547
DZR
zf-tcix
T1R_D3-like
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-ProteinID:
ALQ07672
LinkDB
All DBs
Position
1411402..1413153
Genome browser
AA seq
583 aa
AA seq
DB search
MSYKLRPYQQEAVERTVLHFRKSNDPAVIVLPTGAGKSLVIAELARIAKQKILVLAHVKE
LVEQNSQKYKSFGLEASIFSAGLKEKSLNHQVTFASVQSLSRNLNKLNEHYSLLIIDECH
RVNGDKKSQYGKVISSLKEYNPQLKVLGLTATPYRLGTGWIYHHHYHGFVKGTNESPFKS
CIFELPLRYMIKHNYLTPPNEVDAAISHYDFSSLDSNAFGQYTTDDMNALLKNSERATKA
ILQQVIQYSEEREGVMVFAATVMHAQEILSYLPAHQSALITGDTPNTERDKIIKQFKAKQ
LKYLVNISVLTTGFDAPHVDFIAILRPTESVSLYQQIVGRGLRLSESKTDCLVIDYAGNG
FNLFHPEVGDKKGDSDNEPVQVLCPGCGFANIFWGKTDSAGKVIEHFGRRCKGLLEDDDG
HKEQCDYRFRFKECEQCGAQNDIAARKCHDCGAVMADPDDKLRNALNLKDALVLRCSGLS
VTQIKDELIKITYFDEDGASCDEVYNLANKGGQFIFNKQFGLRVGLGQTPINFKTAEQVV
NAQFELVPPDFVIARKSKKYGWKVADKLFDYKGGFRKANQLSR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagctataaactaagaccttaccagcaagaagccgtagaacgcaccgttttacacttt
agaaagagtaatgatcctgccgttattgtgctaccgaccggtgcaggtaaaagccttgtt
attgctgaacttgcccgtattgctaagcaaaaaatattagtacttgctcatgtcaaagag
ttggtagagcaaaattcgcaaaaatataaaagttttggtttagaggcgagtatattttca
gcaggtttaaaagaaaagtcattaaaccatcaagtaacctttgccagtgtgcaatcactt
tctcgtaatttaaataaattaaatgagcattattcgttacttattattgatgaatgccac
agggtaaatggggataaaaaaagccagtacggaaaagtaataagtagtttaaaagaatat
aaccctcagttaaaagtattgggtttaacagcaacaccttatcggctaggaacggggtgg
atataccatcatcattatcatggctttgttaaagggactaatgaaagcccgtttaaaagt
tgtatttttgaattaccactcaggtatatgatcaaacataattatttaacgccgccaaac
gaagttgatgcagcgattagccattatgatttttcgtctttagatagcaatgcatttggg
caatatacgactgatgatatgaatgcgcttttaaaaaacagtgagcgcgcaacgaaagcg
atattacagcaagtaattcaatacagtgaagagcgtgaaggtgttatggtttttgcagcc
acggtaatgcatgctcaggaaatattaagctacctaccagctcatcaaagtgcacttata
acaggtgatacgccaaacactgagcgcgataaaatcattaagcaatttaaagctaagcaa
ttaaagtatctagttaatatatcggtactaacaaccggctttgatgcgccacacgtcgac
tttatagctattttaagacctacagaatcagttagtttatatcaacaaattgtggggcga
ggtctcaggttatctgaatcaaaaacggattgcttagtaatagattatgctggcaatggt
tttaatttatttcacccagaagtaggcgataaaaaaggcgatagtgataatgaacctgtg
caggtactttgtcctggctgtggttttgcgaatatattttggggtaaaactgattctgca
ggaaaagtaatagagcactttggcaggcgctgtaaagggctgttagaagacgatgatggg
cataaagagcagtgcgattatcgttttaggtttaaagagtgtgagcagtgcggtgcccaa
aatgatattgctgcacgtaaatgccatgattgcggcgcggtaatggccgaccctgatgat
aagttacgtaatgcattaaacttgaaagacgcacttgtgcttcgatgtagtgggttatcg
gtaactcaaattaaagatgaacttattaaaataacgtattttgatgaagatggtgcaagt
tgcgatgaagtatataacctcgcaaataaaggcgggcaatttatatttaataagcaattt
ggtctacgagtagggcttgggcaaacacctattaattttaaaactgcagagcaagtagta
aacgcacaatttgaattagtaccaccggattttgttattgcacgaaaaagcaaaaagtat
ggttggaaagtggctgataagctatttgactataaagggggttttagaaaggcaaatcag
ttaagccgctaa
DBGET
integrated database retrieval system
