Pseudoalteromonas sp. Bsw20308: D172_006795
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Entry
D172_006795 CDS
T04175
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D172_006795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbw03400
]
D172_006795
Enzymes [BR:
pbw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D172_006795
DNA repair and recombination proteins [BR:
pbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D172_006795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALQ07783
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All DBs
Position
1571713..1575012
Genome browser
AA seq
1099 aa
AA seq
DB search
MLNIIQSNRMEALQAQFHQLLKVNPLQSPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPNCIDEPLYLPLKTYLEGDID
GQKTFVLCEKIADVYDQYLMYRPHWIATWDSGKDELDDVDVAIAPWQPDLWRRIVKLSQE
LGQSQFHRANMQGQLLAALETMDNSLLPQRISLFGISAIASSQLEVFEALSKKTEVILFF
FNPSEHYWGDIIDEKTAAKISAKYAKMPLVEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDVFNDTLLGQVQSEIYQLAFKGESLTDNKEWFINDEGKLPIS
ATDTSITLSDCHTPLREVERLHDYLLNLFNQNPTLTPKDIIVMMPDVGTYSPYIEAVFGG
AQGSRFIPYALADLAIEQEKPVLSSFASLANLPFSRFGVSDILDLLQVTQIAEKFGLEAH
EYEQIQYWLERVGVKWGINAAHKSSFDLPAIDLNTWQHGLNRLLLGIAMRDEQCPFNGIY
SADEVEGMALDTLNKLVHFIDVLQSFKEQLTPDDTLTNKAHILSELLNAIYESESDDSWD
LLVLQNVLEELQKHHDNGDYSKAVSQRIVSYLVKQGIQEKGVGQRFLVGQVNFCTLMPMR
AVPFKVVCMLGLNDADYPRNVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSARDNL
YMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFVLNDKSEKTLPACLINQQHLQPFNSHYY
LIDEQANTVLSNHSYNPIWLPSESIKPEPVIALDVTVPEQLDLDVFIRSVCSAQESFYQQ
TLGLRLPQFNEVAKDEEPFSLDALRRYFYLDEILEANINEQPLSTEQILQRGELPQANVG
SLIFESMEHRVDALAGQVKEQIKGGKSEPIEVLLTIEGTKIEGWLNHVYLQKQVFYRSAS
IKAKDLIKGFIYHLAAQSMDQQVETLLLGLDKQITFAPINKADADALLADWFELYKALRA
EPVPFFPVSGYEYVKSGGDITKAMSKFSPQYIGRGEGENPYIRLTVQSLNDCQEEFIKWS
DKLLTPLFEHAKESDHASA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatattattcaatcaaaccggatggaagccctgcaagcgcagttccatcagctg
ttaaaagtaaacccattgcaaagcccgttcgacaaagaagtggtgctagtgcaatcgccg
ggtatgtcgcagtggttaaaaataggtttgagcgaaaacttaggggttgcagcgcaggtt
gattttccgctgccgtcgagctttatttggcagttgtatcagcaattgctgccaaatgtc
cctaaagagtcggcatttaataagcccaaccttgcttggaaactgtttgcaattttacca
aactgtattgacgagccattatatttgccgctaaaaacctatttagaaggcgatatagac
gggcaaaaaaccttcgtgctgtgcgaaaaaatagccgatgtgtacgaccaatatttaatg
taccgaccgcactggatagccacatgggatagcggcaaagatgagcttgatgacgtagat
gtagccattgccccatggcaacctgatttatggcgacgcattgtaaagctaagccaagaa
cttgggcaaagccaatttcatcgcgctaacatgcaagggcaattacttgcagcacttgag
accatggacaatagcttactgccacaacgcattagtttatttggtatatcggcgattgcc
agctcccagcttgaggtatttgaagcgctgagtaaaaaaaccgaggttatattattcttt
tttaacccaagtgagcactactggggcgatattatagatgaaaaaacagcagctaaaata
agcgctaaatacgccaaaatgccgctggtggaagcgcaacaaaaaaaacaaaccaatcca
gatgaagaatactactttataggtaatccgttgttatcgtcgtggggtaaattaggtcgc
gactattttgaacaacttgtacagttagatgcccgttggattgatggttttattgatgtg
tttaacgacaccttactagggcaagtacaaagcgagatttatcagcttgcgtttaagggg
gagtctcttaccgataacaaagagtggtttataaacgacgaaggtaaattaccaatcagc
gcaaccgacaccagtattacgctcagcgattgccatacaccgcttagagaagttgagcgc
ttgcacgactacttacttaacttatttaatcaaaacccaacgcttactcccaaagacata
attgtcatgatgcccgatgtaggcacttacagcccctacattgaagccgtatttggcggg
gcacaaggcagccgctttattccttatgcattggccgatttagccatagagcaagaaaag
cccgtccttagctcatttgcgagtttagctaacttaccgttttcgcgctttggtgtatcg
gatattctcgatttattacaagtgacgcaaatagccgaaaaatttgggcttgaagcacac
gaatacgagcaaattcaatactggcttgaacgtgtaggtgttaaatggggtataaacgca
gcgcataaaagcagctttgatttacccgctatcgatttaaatacctggcaacatgggctc
aaccgtttactgcttggtatagccatgcgcgacgaacaatgcccgtttaacggtatttac
agcgctgatgaagtagaaggcatggcgcttgatacactcaacaagctcgtgcattttatt
gatgtactgcaaagctttaaagagcagctaacgcccgatgatacgctcactaataaagcg
catattttaagcgagctattaaacgccatatacgaaagtgaaagcgacgacagctgggat
ttattagtactgcaaaacgtgctcgaagagttacaaaaacaccacgacaacggcgattac
agtaaagcagtttcgcagcgtattgttagttacttagttaaacaaggcattcaagaaaaa
ggcgtagggcagcgatttttggtcgggcaagtaaacttttgtacgcttatgcccatgcgc
gccgtgccatttaaagtggtatgtatgctgggcttaaatgatgccgactacccacgtaac
gtacaacccattggttttgacttagtgccttattctaaaaagcaaaaaggtgaccgatca
cgtaaattagatgaccgctacttatttttagaagcgctactgagtgcccgcgacaactta
tacatgagttacattggtcgctcgtgttttgataaccaaccgcgcatgccatcaaccctt
gtaagtgagctgttagaatatattgggcgtagttttgtattaaacgataaaagcgaaaaa
acgctgcccgcatgtctaatcaatcagcagcatttacagccctttaatagccattactat
ttaatcgatgagcaagccaatactgtgctgagcaaccacagttacaatccaatttggctg
ccaagtgagtcaattaaaccagagccagttattgcacttgatgtgactgtgccagagcag
ttagatcttgatgtgtttattagaagtgtgtgcagcgcacaagagagcttttatcaacaa
acattaggtttacgcctgccacaatttaacgaagtagcaaaagacgaagagccatttagt
ttagatgcgctgcgccgttatttttaccttgatgaaatactcgaagcaaacataaacgag
caaccactgagtaccgagcaaatactgcagcgaggtgagttacctcaagccaatgtaggc
agcctcatatttgagagtatggagcaccgagttgatgcgcttgcagggcaagtaaaagag
cagattaaaggcggaaaaagtgagccgatagaagttttgcttaccattgaaggcaccaaa
atagagggctggctcaatcatgtgtatttgcaaaaacaagtgttttatcgcagtgcgagt
attaaagcgaaagatttaattaaaggctttatttatcaccttgcagcgcaaagtatggat
caacaagtagaaacgttgctacttgggcttgataagcaaattacctttgcgcccataaac
aaagccgatgcggatgcactattagccgattggtttgagttatacaaagcgctgcgcgca
gagcctgtgccgttttttccggtaagtggttatgaatacgttaaaagcggcggcgatata
acaaaagcaatgagcaaatttagcccgcaatacatagggcgaggcgagggcgaaaatccg
tatattcgcttaacggtgcaatcgctaaacgactgccaagaagaatttataaaatggagt
gataaattgctcacgcctttattcgaacacgcaaaggagagtgaccatgcaagcgcttaa
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