Pseudoalteromonas sp. Bsw20308: D172_008285
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Entry
D172_008285 CDS
T04175
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D172_008285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbw02000
]
D172_008285
Enzymes [BR:
pbw01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
D172_008285
Transporters [BR:
pbw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
D172_008285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_29
ABC_ATPase
AAA_16
MMR_HSR1
AAA_18
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
ALQ09743
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All DBs
Position
1935642..1937387
Genome browser
AA seq
581 aa
AA seq
DB search
MDQSTTQIYKRLISYVGAYKSVAFVAIIGMIGYSGMDALFIQLMKPFIDEGLNQRNSDVL
KYAPFVVIALVIGRGIFNFMSSYCLSYVGSQVVRSLRQELFEHILHLPVSFHDKNSTGDL
ISKITFDTEQVQQAITKALLIVVREGAFVVFLLGVMFYTSWKLSLIFLVIIPLVAIIVAV
VSKRFRHISKSIQSAMGQVTRSSEQMLSGHKVIHGFGGQEQEINKFSKINNHNRQQRIKM
DATKALSVSIIQILAASAMAVILWVVSMPSMIDTISSGDFVVLISSMMMLLRPLKQLANV
NSDMQRGISASQSIFLILDENVEKDTGTVAVDKVKGLIEVKNVTFKYPTKDEAVLNDLSL
TIKAGESIALVGRSGSGKSTISNLLPRYYDLDLPSEILLDGIALQDYKLTDLRRQFALVS
QQVVLFNDTIANNICYGIKHDVTNDELVQVAKQAHVWEFVKDLPEQLNTMVGENGVMLSG
GQRQRIAIARAILKDAPILILDEATSALDTESEKLIQQALETLMKDKTSIVIAHRLSTIE
NSDRIYVIDNGRVIESGDHNSLLANDGTYSALCKMQFGDQA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagtactacacaaatttataaacggttaatttcttacgtcggtgcatataag
agtgtagccttcgtcgctattataggaatgattggctattcaggaatggacgcgctattt
attcaattaatgaaaccatttattgatgaaggtttgaaccaacgaaatagcgatgtatta
aagtatgctccatttgttgttattgcactggtgattgggcgtggtatttttaattttatg
tcatcgtattgtttgagctatgtaggttcacaagttgtacgatctttacgccaagagtta
tttgagcacatattgcatttacccgtttcttttcatgacaaaaactccacgggcgattta
atttcaaaaatcacttttgacacagagcaagttcaacaagcaataactaaagcgctactt
attgttgtacgtgaaggggcctttgtcgtctttttacttggtgtaatgttttataccagt
tggaagctctcacttatatttctagtcatcatccctctcgtcgctattattgtagcggtt
gtatcgaaacgttttcgtcatatttctaaaagtatccaatcagctatggggcaggttaca
cgtagctctgaacaaatgcttagcggacataaagtaattcacgggtttggtggacaagag
caagaaataaataaattttctaaaattaataatcataaccgtcagcagcgcattaaaatg
gatgcgacaaaagccttaagtgtatccattattcaaatactcgccgcaagtgctatggct
gttattttatgggtggtatcgatgccttctatgattgatactataagctctggggatttt
gttgttttgatatcatcaatgatgatgttgctgcgcccacttaaacaattggctaatgtt
aatagcgatatgcaacgtggcatttctgcatctcaaagtatatttttaatacttgatgaa
aatgtagagaaagatactggcacagtcgctgttgataaagttaaagggttaattgaagta
aaaaatgtaacctttaagtacccaactaaagatgaagccgtattaaacgatttgtcgcta
acgattaaagcgggtgaaagtattgccttagtagggcgctcaggctcgggtaaatcaact
atttctaatttattgccacgttactatgatttagatctgccgagtgaaatattacttgat
ggcatagccctgcaggattataaattaacagatttgcgtcgccaatttgctttggtttct
cagcaagtcgtgttatttaacgatacgattgccaacaatatttgttatggcataaagcat
gatgtaactaatgacgaattagtacaagtagcaaaacaagcgcatgtttgggagtttgtt
aaagatcttccagaacaattaaacaccatggtaggtgaaaatggcgtaatgctttctggt
ggtcaacgccagcgaatagctatagcgcgtgcaatattaaaagatgcacctattttgatt
ttagatgaagcaacatcagcacttgatacagagtctgaaaagcttattcagcaagcgtta
gaaacgctaatgaaagacaaaacctcaattgttattgcgcatcgcttatctactattgaa
aacagtgaccgaatttatgttattgataacggtcgtgtaatagaaagtggcgatcacaat
agcttattagcaaatgatggtacgtattcagccctttgcaaaatgcagtttggtgatcag
gcgtga
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