Pseudoalteromonas sp. Bsw20308: D172_009560
Help
Entry
D172_009560 CDS
T04175
Name
(GenBank) AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbw03000
]
D172_009560
Transcription factors [BR:
pbw03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
D172_009560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_11
MarR
HTH_27
HTH_34
HTH_5
NirdL-like_HTH
HTH_IclR
HTH_Crp_2
Rrf2
HTH_20
MarR_2
HTH_1
HTH_39
FaeA
Sigma70_r4
LexA_DNA_bind
HTH_23
TrmB
HTH_DeoR
wHTH-PRTase_assc
Fe_dep_repress
DUF7343
HTH_6
HTH_CodY
DUF603
ICAT
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ALQ08279
LinkDB
All DBs
Position
complement(2231203..2231661)
Genome browser
AA seq
152 aa
AA seq
DB search
MSLNHVDRQILALLQQDASLSTAEIADKVGLSQSPCWRRIAKLEQDGYIKSKVALLDEKK
LGFDMLVYAHVRLSNHGKKNLAEFEKLIMSYDQVTECYTMAGTMDFMLRIISQGIEGYEH
FVRDNLLSLEYVQEVHSNVTMTCVKRSTSLPL
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaaatcacgtagatcgccaaattttggcacttttacaacaagatgccagttta
tcaacagctgaaattgctgataaagtcggcttgtcacaatcaccttgctggcgacgcatc
gctaaacttgagcaagatggatacataaaaagcaaagtagctcttttagatgagaaaaaa
ctaggctttgatatgcttgtatatgcacatgtgcggttatcaaatcatggtaagaaaaac
cttgctgagtttgaaaagctgattatgagctacgaccaagtgactgagtgttacactatg
gctggaacaatggacttcatgctacgtattatttcacaaggcattgaaggctatgagcac
tttgtccgtgataatttattaagcttagaatacgtacaagaagtacattctaatgtaaca
atgacatgtgtaaaacgtagtacttctcttcctttataa
DBGET
integrated database retrieval system
