Pseudoalteromonas sp. Bsw20308: D172_009835
Help
Entry
D172_009835 CDS
T04175
Name
(GenBank) alpha-amylase
Organism
pbw
Pseudoalteromonas sp. Bsw20308
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
hDGE_amylase
Malt_amylase_C
GxGYxYP_N
A_amylase_dom_C
Motif
Other DBs
NCBI-ProteinID:
ALQ08328
LinkDB
All DBs
Position
complement(2297145..2299004)
Genome browser
AA seq
619 aa
AA seq
DB search
MKKSVYVPAVLCSALIATGCSENNKPEQQQTPAHMQNELTKPVVYQVFTRLFGNTETANV
PWGTKEQNGVGKFADFNDAALKGIKELGTTHVWYTGVLHHALVGDYTDYGISQDDPDVVK
GRAGSPYAIKDYYDVNPDLAVNVTNRMGEFSQLIERTHSHGMKVVIDIVPNHVARNYQSL
GKPKGVKDFGEQDDTTKAYDKNNNFYYVPEQSFQVPTSPEYKVLGGNAHPLVDGFFDETP
AKWTGNGARSPKPDMNDWYETVKVNYGVKPDGSYDFVELPNEYKNKDYRAHYAFWQDKEL
PNSWYKFRDIALFWLDKGVDGFRYDMAEMVPVEFWSFLNSSIKMQKPDAFLLAEVYNPKM
YRAYIHQGKMDYLYDKVGFYDTLKAIMQSKQAANTIFAAQSQVTDIEAHMLHFLENHDEQ
RIASPDFAGKAVWGKPAMVVSNLISRAPTLLYFGQDVGEDGSEYAGFGLPTRTSIFDYIG
VPAHQAWMNSGKFDGANLTKEQVALRDYYKAILSLNSLPAVVGGEMSELSVTGSERVVGF
TRKLGQQILYVLSNFSEQSQTITVNLSKVQLAGLSEYTQLHDLLEQHSTEITSGSQGATF
TLTLDAFSSAVLTNKANNE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcagtttatgtacccgcagtactttgtagtgcacttattgctacagggtgt
tcagaaaacaacaaacctgaacaacaacaaacacccgcacacatgcaaaatgagcttacc
aagccggttgtatatcaagtatttacccgtttgtttggtaatactgaaactgccaatgtg
ccatggggcactaaagagcaaaatggtgtaggtaaatttgccgactttaacgatgcagcc
ctaaaaggcattaaagagctaggtacaacacacgtttggtataccggtgtgttacaccac
gccttagtaggcgattacaccgactatgggatctcacaagatgaccccgatgtagtaaag
ggccgtgcaggttcaccgtatgcaattaaggattactacgatgttaaccccgacttagcc
gttaatgtgacgaaccgtatgggagagtttagccagctcattgagcgtacacacagccat
ggcatgaaagtagttattgatatagtgcctaaccatgttgcccgtaattatcaatcgcta
ggcaagcctaaaggcgttaaagactttggcgagcaagatgacacgactaaagcgtacgat
aaaaacaataatttttactacgtaccagagcagtcttttcaggtgccaacatcgccagag
tataaagtgctaggcgggaatgctcatcctcttgttgatggtttttttgatgaaacaccc
gccaaatggacaggtaatggtgctcgatctccaaaaccagatatgaacgattggtacgaa
acagtaaaagtgaattacggtgtaaagcctgatggcagctacgactttgtagagttacca
aatgaatacaaaaataaagattaccgtgctcactacgcgttttggcaagataaagagctc
cctaacagctggtacaaatttagagacattgcgcttttttggttagataaaggtgttgat
ggctttaggtacgacatggccgaaatggtgccggttgaattttggagctttttaaactca
tcaataaaaatgcaaaaacctgatgcatttttacttgccgaagtttacaacccaaaaatg
taccgtgcttatatccatcaaggtaaaatggactatttatacgataaggtcggtttttac
gataccttaaaagcaattatgcaaagcaagcaagctgctaatactatttttgcagcccaa
agccaagttactgatattgaagcgcacatgctgcattttttagaaaatcacgatgaacag
cgtatcgcaagcccagactttgcaggcaaagccgtgtggggtaaaccagccatggtggtt
tcaaacctgattagccgtgcacccactttattatattttggccaagatgtaggggaggat
ggatctgaatatgcaggctttggcttaccaacccgcaccagtatttttgattacattggc
gtaccagcgcatcaagcatggatgaatagcggtaagtttgacggcgctaatttaacaaaa
gagcaagtagcacttcgtgattactataaagccattctgtcacttaatagtttacctgca
gtggtgggcggtgaaatgagtgagcttagcgttacaggaagtgagcgagttgtaggcttt
acccgcaaacttggccaacaaatactttacgtattaagtaactttagcgaacaatctcaa
acaattacggttaatttatcaaaagtgcaattagcgggactcagcgaatacactcaattg
catgacttacttgagcagcatagcaccgaaattacatcagggtctcaaggcgcaaccttc
acacttacacttgatgcatttagcagcgcagtattaacaaataaggctaataatgaataa
DBGET
integrated database retrieval system
