Pseudoalteromonas sp. Bsw20308: D172_009900
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Entry
D172_009900 CDS
T04175
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbw03009
]
D172_009900
Enzymes [BR:
pbw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
D172_009900
Ribosome biogenesis [BR:
pbw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D172_009900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALQ08341
LinkDB
All DBs
Position
complement(2321514..2322383)
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AA seq
289 aa
AA seq
DB search
MSIQGEKLQKVLARAGVGSRREMEKYIDANRVSVNGKVAKLGDRVEETDLIRVDGHTVKI
EEKADRICRVIMYNKPEGELSTRKDPEGRRTVFDRLPRIDGDRWIAVGRLDVNTSGLMLF
TNDGELANRLMHPSYEVEREYSARVFGEVTNETVKNLLRGVELEDGPAKFTTVTPMGGEG
VNRWFNVTLNEGRNREVRRLWQSQDAEVSRLIRIRYGKLELDKRVPQGGWMEYDLETVNY
LRKTVKLGRETQTKLSVMPEKRKDKRAKINQIRKAVKKHNQRVKPTKRK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacaaggtgaaaagttacaaaaagtcctagcccgtgcaggcgtaggctcgcgc
cgtgaaatggaaaaatacattgatgcaaaccgcgttagtgtaaacggtaaagtggcaaag
ttaggcgaccgtgttgaggaaacagacttaattcgtgttgacggacacactgtgaaaatt
gaagaaaaagcagatagaatttgtcgtgtaattatgtataacaaaccagaaggtgagcta
agtacacgtaaagatccagaagggcgtcgtactgtatttgaccgacttcctcgtattgat
ggcgatcgttggattgcagtaggccgcttagacgttaatacatcaggtttgatgctgttt
actaatgatggtgagttagcaaaccgtttaatgcacccaagttatgaagtagaacgtgaa
tactctgcacgtgtatttggtgaagtaaccaacgaaacggttaaaaacctactacgtggt
gttgagcttgaagatggcccagctaaattcacgactgtaaccccaatgggtggcgaaggt
gttaaccgatggtttaacgtaacgttaaatgaagggcgtaaccgcgaagtccgccgttta
tggcaatctcaagatgcggaagtatctcgtcttattcgtattcgttacggtaaattggag
ctagataagcgcgtaccgcaaggtggttggatggagtatgatctagaaacggtaaactat
ttacgtaaaaccgttaaattaggtcgcgagacgcagactaagctttctgttatgccagaa
aagcgcaaagataaacgcgctaaaatcaaccaaatccgtaaagcagttaaaaaacacaat
caacgtgttaagccgactaaacgtaaataa
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