Pseudoalteromonas sp. Bsw20308: D172_010405
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Entry
D172_010405 CDS
T04175
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbw03000
]
D172_010405
Transcription factors [BR:
pbw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D172_010405
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
HTH_24
HTH_5
PBP_like_2
HTH_20
DDE_Tnp_IS66
MarR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ALQ08437
LinkDB
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Position
complement(2425621..2426565)
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AA seq
314 aa
AA seq
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MDLRHISFRLLEVFMSVVKTGSISETARRLHLTQPTVSLQIKRLQEAVGEPLLLIQQQKL
HVTDAGLELFKTCQQVFGHFEDYQDFLTELNGGSRGRCKIAMVNTAQYILPKLLGPYSNL
HPHVELPLEIGNRAEVLDRFERGEDDIYVFSHPPSLEHAQAARFLHNPLEFIVPLNHPLA
HVKAVKLTDLMQYRFLLRENGSATRMLFESELQSRGLVLSDSVQMASNEAIRVAVASGMG
IAVLSRHVLATDDTSFKILNVTDAHLASHWYFVMRTDRHISHAARNFLKFAKQHVEQYLD
TQWVRNELHNLDLN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggatttacgacatatatcgtttaggttgcttgaagtatttatgagcgtggttaaaacg
ggttcaataagcgaaaccgcaaggcgtttacacctaacacagccaacggtatcgctacaa
ataaagcgactgcaagaagcggtaggcgagccattactccttatacaacagcaaaagtta
cacgtgaccgatgcagggcttgaactgtttaaaacatgccaacaggtgtttggacatttt
gaagactatcaagattttttaaccgagcttaatggtggatcgcgcggccgttgtaaaatt
gcaatggttaatacggcgcaatatattttaccaaaactacttggaccttatagtaattta
catccccatgttgagctcccgcttgaaataggtaacagggctgaggtacttgataggttt
gagcgaggagaggacgatatttatgtatttagccacccgccgtcgcttgaacacgcacaa
gctgcgcgttttttgcataatccactggaatttatagtgccgctaaaccatccgttagct
catgtaaaagccgttaaattaactgatttaatgcagtatcgttttttactacgagaaaat
ggctcagcaacacgtatgttatttgaaagcgagttacaaagccgagggttagtgctgagc
gatagcgtgcaaatggcgagtaatgaagcaatacgcgtcgcggttgcatcggggatgggc
attgcggttttatcacgccatgtacttgcaacagacgatactagttttaaaattttaaac
gtaaccgatgcccatttagcgagtcattggtattttgtaatgcgaacagataggcacata
tcgcatgctgcacgtaactttttaaagtttgcgaagcagcacgtagagcaatatttagat
acgcagtgggtgcgtaatgagttacataacttagatttaaactag
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