Pseudoalteromonas sp. Bsw20308: D172_012035
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Entry
D172_012035 CDS
T04175
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbw03016
]
D172_012035
Enzymes [BR:
pbw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
D172_012035
Transfer RNA biogenesis [BR:
pbw03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
D172_012035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ALQ08709
LinkDB
All DBs
Position
2754008..2755456
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AA seq
482 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSQKMAELLDATNGYQLTEDATDADVILLNTCSIREKAQEKVF
HQLGRWKLLKDDKPDLIIGVGGCVASQEGDSIRQRAPFVDVIFGPQTLHRLPEMIKQVQG
DKGSSVVDISFPEIEKFDRLPEPKADGPSAFVSIMEGCSKYCTFCVVPYTRGEEVSRPVD
DVLLEIAQLAEQNVREVNLLGQNVNAYRGDTHDGEICYFSDLIRLIAAIDGIDRIRYTTS
HPVEFTPDIIEVYADVPELVDHLHLPVQSGSDRILNLMKRGHTAIEYKSTIRKLRKIRPN
LSMSSDFIIGFPGESKEDFEATMKLISDIGFDMSFSFIYSARPGTPAADLPDDVTEQEKK
ERLYLLQNRITQMAQQISRQMFDTEQRILVEGPSKKNPMELRGRTENNRVVNFVGPHTVI
GQFVDVRITEALPNSLRGDLIRTESEMNLRREVAPSAILTKAAAAEPKPDTVNEIGVATF
VP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaagctgcatattaaaacctggggttgtcagatgaacgaatacgactctcag
aaaatggctgaacttttagatgccactaacggctaccagctaactgaagatgcaacagat
gccgacgtaatcttactcaacacctgttcaattcgtgaaaaagcacaagaaaaagtattt
caccagttaggtcgttggaagttgttaaaagacgacaagccagatttaataattggtgta
ggtgggtgtgttgcttcacaagaaggtgactctattcgtcaacgtgcgccatttgtagat
gttatttttggcccacaaacactacaccgtttaccagaaatgattaaacaagtgcaaggc
gacaaaggctcatcggttgttgatatttcattcccagagattgaaaaatttgaccgcctg
ccagagccaaaagctgatggcccatctgcgtttgtatcaattatggaaggctgttctaaa
tactgtactttttgtgttgtaccttatactcgcggcgaagaagttagtcgcccagtagat
gacgtattacttgaaattgcacagcttgctgagcaaaacgtacgtgaagttaacctatta
ggccaaaacgtaaatgcataccgcggagacacgcacgatggcgaaatttgttacttctca
gatttaattcgtcttattgctgctattgatggtattgaccgtattcgttacaccacatcg
catccggtagaatttacgccagacatcattgaggtttacgccgatgtaccagagcttgta
gatcacttacacctaccagtacaaagtggttcagaccgtatattaaacctaatgaaacgt
ggccatacggcaattgaatacaaatcgacaattcgtaagttacgtaaaattcgccctaac
ttaagcatgtcgtcagatttcattattggttttccaggcgaaagtaaagaagactttgaa
gcaaccatgaagcttattagcgacattggttttgatatgagctttagctttatttacagt
gcgcgcccaggtacgccagcggcagatttaccagatgacgtaacagagcaagagaaaaaa
gaacgcttatacttactacaaaaccgtattacacaaatggcgcagcaaattagccgtcaa
atgttcgatacagagcaacgtatccttgttgaaggtccttctaagaagaacccaatggaa
ttacgtggccgtaccgaaaacaaccgtgtagtaaactttgttggcccgcacacagtgatc
ggacagtttgttgatgtacgtattaccgaagcactgcctaactctttacgtggtgactta
attcgtacagaatcagaaatgaacttacgacgtgaagtcgctccttcagctattttaact
aaagctgcagctgcagagccaaaaccagacactgttaacgaaattggcgtagctactttc
gttccttag
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