Pseudoalteromonas sp. Bsw20308: D172_012185
Help
Entry
D172_012185 CDS
T04175
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw00550
Peptidoglycan biosynthesis
pbw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D172_012185
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbw01002
]
D172_012185
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbw01011
]
D172_012185
Enzymes [BR:
pbw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D172_012185
Peptidases and inhibitors [BR:
pbw01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
D172_012185
Peptidoglycan biosynthesis and degradation proteins [BR:
pbw01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
D172_012185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
DUF6317
MVD-like_N
Motif
Other DBs
NCBI-ProteinID:
ALQ08739
LinkDB
All DBs
Position
2782726..2783886
Genome browser
AA seq
386 aa
AA seq
DB search
MKSIKHKILKGVCGLVCTAAVFSASAQIIPAPPQVNAKGYFLVDFTTGKVIAQGEADTQL
APASLTKMMTSYVIGTEIKAGNIAPTDMVTVSEKAWAKNFPESSKMFIEVGKQISVDQLN
HGIIIQSGNDACVAMAEHIAGSESAFADLMNAHATKLGMSNSHFINSHGLDTNEHYTTPR
DMATLGAALIRDVPDEYALYKQKSFTYNGIKQYNRNSLLWDESLDVDGIKTGHTSEAGYS
LVTSATKNGMRLIAVVMGTSSERARKVENKKLLNYGFRFYETITPYKAGDSFAEQRIWMG
NKENVSLGILEDTPITIPRGQHKNLKANFELDNTLEAPLAKGTKVGTLFLQLEGEDIAQY
PLVTLEEVEEGSFFSKIYDYLRLQIM
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctattaaacataaaatcctcaaaggtgtatgcggcttagtttgtacagccgcc
gtattttcagccagcgcccaaattatcccggcaccacctcaagttaatgcaaaaggttat
tttttagtagactttacaacaggtaaagtaattgcccaaggtgaagctgatacgcagcta
gccccagcaagcttaactaagatgatgaccagttatgtaattggtactgaaattaaagcc
ggcaatattgcaccaacagatatggtaactgtgagtgaaaaagcatgggctaaaaacttc
ccagaatcgtctaagatgtttattgaagtaggtaagcaaattagtgttgatcagcttaat
cacggcattattattcaatctggtaatgatgcctgtgttgcaatggctgaacatattgct
ggaagtgaaagcgcatttgctgatttaatgaatgcacatgctactaaattaggtatgagt
aacagccattttatcaatagccacggccttgatacgaatgagcattatactactccacgc
gatatggcaaccttaggcgcagcacttattcgtgacgtaccggatgaatacgcactttat
aaacaaaagtcgtttacttataacggtattaagcaatataaccgtaactcgctattatgg
gatgaaagcttagacgtagacggtataaaaacaggccacacctcggaagctggctacagt
ttagtcacttcagcaactaaaaatggtatgcgtttaattgccgttgtaatgggcacttca
agcgaacgtgctcgtaaagtggaaaataaaaaactacttaactacggttttcgtttctat
gaaacaattaccccgtacaaggccggcgatagctttgctgagcaacgtatttggatgggt
aacaaagaaaatgtatctttaggtattttagaagatacaccaattactattccacgtggt
caacataaaaaccttaaagctaactttgagctagataacacgcttgaagcaccactcgct
aaaggcactaaagtaggtacgttattcttacaattagagggtgaagacattgctcaatac
ccactagtaacacttgaagaagtggaagaaggcagcttctttagtaagatttatgactac
ttacgtttacaaataatgtag
DBGET
integrated database retrieval system
