Pseudoalteromonas sp. Bsw20308: D172_012405
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Entry
D172_012405 CDS
T04175
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbw03016
]
D172_012405
Enzymes [BR:
pbw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D172_012405
Transfer RNA biogenesis [BR:
pbw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D172_012405
Prokaryotic type
D172_012405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALQ08780
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All DBs
Position
complement(2827089..2828048)
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AA seq
319 aa
AA seq
DB search
MAKRSKGRAVDGILLLNKPQGISSNKALQQAKGVYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYIVRAQLGERTTTSDSDGEIVSTKDVNVTREQLTKEIAAFVGESDQ
YPSMYSALKYQGRPLYKYAREGIEVPRKCRKINVFSLSFDEFDEQNNVLQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRTAVGQYPADKMVSLDEIEALLAKAKEEELAPSTYLDS
LLLPIDTALTDLPVVEITKEQGGVFSHGQAVELPIALPDGAIKVVADNIFIGTGERNSNG
HLKVKRGLASQQDDYVKPE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcagtaaaggccgtgcagttgacggtattttgttgttaaacaaaccgcaa
ggcatttcatcaaataaagcattacagcaagcaaaaggtgtttattttgcgcaaaaagct
gggcacacaggtgctttagatccacttgctacaggtatgctgccaatttgttttggtgaa
gcgactaagtttacgcagtttttactcgatacagataaaacctatatcgttcgtgcacaa
ctgggtgagcgtacaacaacatcagattctgatggcgaaattgttagcactaaagatgtg
aacgtaacgcgtgaacagctaacaaaagaaattgctgcttttgttggtgagtctgatcaa
tatccgtcaatgtactcggcacttaagtatcaaggtagaccgttatataagtacgctcgc
gaaggtattgaagtacctcgcaaatgcagaaaaataaacgtgtttagcttatcgtttgac
gaatttgatgaacaaaacaacgtattacaaatgacggctcatgtatctaaagggacgtac
attcgtacaatcgttgacgatttaggcgaaaacctaggctgcggtgcacacgttattatg
ctccacagaaccgctgttggtcagtatccggcagataaaatggtatcgcttgatgaaatt
gaagcattacttgctaaagcgaaagaagaagagcttgcgccttcaacttatttagactcg
ttgttattacctatagacactgctttaactgatttacccgttgttgaaatcacaaaagaa
caagggggagtttttagtcacgggcaagctgtagaattaccaatcgctttacctgatggt
gcaattaaagttgttgcggataatatatttattggtactggtgaacgcaactcaaatgga
catttaaaggttaaacgtggtcttgctagccagcaagatgattacgtaaagccggaataa
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