Pseudoalteromonas sp. Bsw20308: D172_012420
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Entry
D172_012420 CDS
T04175
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbw03021
]
D172_012420 (nusA)
03009 Ribosome biogenesis [BR:
pbw03009
]
D172_012420 (nusA)
Transcription machinery [BR:
pbw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D172_012420 (nusA)
Ribosome biogenesis [BR:
pbw03009
]
Prokaryotic type
rRNA transcription factors
D172_012420 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ALQ08783
LinkDB
All DBs
Position
complement(2831362..2832861)
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AA seq
499 aa
AA seq
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MAKEILLVAEAVSNEKAVPKEKIFEALEFALATATKKKHDGEIEVRVAIDRKTGDYDTFR
RWQIAAVLEDGSLENPYSEITLEAAQVEEPDLQMGDYVEEQIDSIKFDRITTQMAKQVIV
QKVREAERALVVDAYKDQVGELVTGVVKKATRDSIVLDLGNNAEAVIYRDDMLPRENFRP
GDRIRGLLYEVKPEARGAQLFVTRSKPEMLMELFRIEVPEIGEEMIELRAAARDPGSRAK
IAVKSNDKRIDPIGACVGMRGARVQAVSSELGGERVDIVLYDDNPAQFVINAMSPAEVAS
IVMDEDTHSMDIAVDADNLAQAIGRNGQNVRLASQLTGWELNVMTVEDMRTKNEAESDKL
LNLFTENLEIDDEFASLLINEGFSTLEEVAYVPASEFLEIDGLDEETVDLLRSRAKDALT
TKALKTEESLEGAEPAEDLLALEGLERHLAFVMASKGVVTLEDLAEQGIDELVDITELSS
EKAGELIMAARNICWFADE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagatattattggttgctgaagccgtttccaatgagaaagcggttccaaaa
gaaaagatttttgaagctttagagttcgcattagcgacagcgacaaagaaaaagcatgat
ggcgaaattgaagtacgtgtagcaattgaccgtaagaccggcgattacgatacgttccgt
cgttggcagattgcagcagtattagaagatggttctttagagaacccatacagcgaaatt
acgttagaagctgcgcaggttgaagaacctgatttgcagatgggcgattacgttgaagag
caaatagattcaattaaatttgaccgtataactacacaaatggctaagcaagtaatcgta
caaaaagtacgtgaagctgagcgtgctttagtagtcgatgcatacaaagatcaagttggt
gagttagtaaccggtgttgttaaaaaagcaacacgtgattctatcgttcttgatttaggc
aataacgctgaagctgttatctaccgtgatgatatgcttccacgtgaaaacttccgcccg
ggtgaccgtatccgtggtcttttatacgaagttaagcctgaagctcgcggcgcacaatta
tttgtaacgcgttctaagcctgaaatgctaatggagctattccgcattgaggtgccagaa
attggcgaagaaatgattgagttacgtgcagctgcgcgtgatccaggctctcgcgctaaa
attgcagttaaatctaacgacaaacgcattgacccaattggtgcatgtgttggtatgcgt
ggcgcacgtgttcaggctgtatcgtcagaacttggcggcgagcgtgttgatatcgttctt
tatgacgataatccagcgcagtttgttattaatgcaatgtcacctgcagaagttgcttca
attgtaatggatgaagacactcattcaatggatattgcagttgatgcagataacctagcg
caagcgattggtcgtaatggtcaaaatgttcgtttagcaagccaactaacaggttgggaa
ctaaacgtgatgactgttgaagacatgcgtactaaaaatgaagctgaatcagataagttg
cttaacttattcactgaaaatttagaaattgatgatgagtttgcctcattacttataaat
gaaggtttctcgacacttgaagaagtggcgtacgtaccagcatctgaatttttagaaatt
gatggcttagacgaagaaacagttgatctgctgcgctcacgtgcaaaagatgcattaaca
actaaagcacttaaaacggaagaaagcttagaaggcgcagagcctgctgaagacttactt
gcgcttgaaggcttagagcgtcacttagcatttgttatggcaagcaagggtgttgttaca
cttgaagacttggcagagcaaggtattgacgaattagttgatattacagaactttcatct
gaaaaagcgggtgaactaattatggctgcacgaaacatttgttggtttgcagacgagtaa
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