Pseudoalteromonas sp. Bsw20308: D172_013440
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Entry
D172_013440 CDS
T04175
Name
(GenBank) Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw02020
Two-component system
pbw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D172_013440
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D172_013440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pbw02022
]
D172_013440
02035 Bacterial motility proteins [BR:
pbw02035
]
D172_013440
Two-component system [BR:
pbw02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
D172_013440
Bacterial motility proteins [BR:
pbw02035
]
Flagellar system
Flagellar assembly proteins
Others
D172_013440
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
MFD_D3
FleQ
AAA
DUF2089
MerR
AAA_16
HTH_20
MCM
AAA_3
AAA_19
AAA_14
HTH_24
nSTAND3
LigB
HTH_23
DUF4411
Motif
Other DBs
NCBI-ProteinID:
ALQ08962
LinkDB
All DBs
Position
complement(3044911..3046350)
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AA seq
479 aa
AA seq
DB search
MSNIILVVEDDAGLREALIDTLEMSGIECVSANSAEQAMLLLKKEQFSLVVSDVQMGTMS
GLDLLRSIKLNYPDLPVLMMTAYATIDDAVEAMRLGAIDYMAKPFAPEVLLNMVSRYLPE
KARETDGPIVADPSSIQLLELASKVARSDASVMVLGPSGSGKEVLARYIHDKSSRCNEPF
VAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEITEMDLGLQAKL
LRVLQEREVERLGARKTIQLDVRVLATSNRDLKEAVAKNQFREDLYYRLNVFPLMWRPLC
QRPGDIIILAKHLIERHINKSKEPMAYLDKAAEQKLLAHAWPGNVRELDNVIQRALILRS
GNTINEHAIFIENLVASDFVITPTEVLETATSNEAINSLSTAYYDEKMPMVGEPKQDLLA
VDTGSYKDELKDKEHSIILETLARCQGKRKDVAETLGISPRTLRYKLAQMRDLGISLPA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatattattttagtcgtagaagatgatgcggggctccgtgaagctttaattgat
acgctggagatgtcaggtattgaatgcgtttcagctaatagcgcagagcaagcgatgtta
ttgcttaaaaaagagcaattttcattagtcgtaagtgatgtgcaaatgggaaccatgagc
ggtttggacttactgcgaagtattaaattaaattatcccgatttacctgtattgatgatg
acggcctatgccacgattgatgatgctgttgaagctatgcgtttaggtgctattgattat
atggctaaaccatttgcacctgaagtgctgctaaatatggtgagtcgctatttgcctgaa
aaagcgagagagacagatggccctattgttgccgacccaagtagcattcaattactcgaa
cttgcaagtaaagttgcacgctctgatgcgagtgtaatggtgctcgggcctagtggttca
ggtaaagaagtgctcgcgcgttatattcacgataaatcgagtcgatgcaatgaacccttt
gttgctataaattgtgctgcgatccctgaaaatatgcttgaggccactttatttggttac
gaaaaaggggcgtttacaggtgctattcaagcatgccctggtaaatttgaacaagcgcaa
ggcggaacaattttactagatgaaatcactgaaatggatttaggattacaggcaaagcta
ctacgagtgctacaagagcgggaagtagagcgtttaggtgctcgtaagacaatccaacta
gatgttcgtgtattagcaacgagtaatcgtgacttaaaagaagcggtcgctaagaaccaa
tttagagaggacttatattaccgacttaatgtttttccattaatgtggcgacctctttgc
cagcgccctggtgatataattatactcgcaaagcatttaatagaacgccatataaataaa
agtaaagagcctatggcctacttagataaagcagcagagcaaaaactacttgctcatgca
tggcctggtaatgttcgtgaactggataacgtaattcagcgagcactgatactacgaagt
ggtaatacaataaatgaacatgctatttttatcgaaaacttagtagcaagcgattttgta
attacaccaacagaagtattggaaacagcaacgtcaaacgaagctataaatagcttaagc
acggcatattacgatgaaaaaatgcctatggttggtgagccaaagcaagatttacttgcg
gttgacaccgggagctataaagatgaacttaaagacaaagagcatagtattattttagaa
acattagctcgctgtcaaggtaagcgcaaagatgtagcagaaacattaggtattagccct
cgaacattacgttataagctagcgcaaatgcgcgatttaggtatttcacttcctgcataa
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