Pseudoalteromonas sp. Bsw20308: D172_014485
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Entry
D172_014485 CDS
T04175
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw03030
DNA replication
pbw03430
Mismatch repair
pbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D172_014485
03430 Mismatch repair
D172_014485
03440 Homologous recombination
D172_014485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbw03032
]
D172_014485
03400 DNA repair and recombination proteins [BR:
pbw03400
]
D172_014485
Enzymes [BR:
pbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D172_014485
DNA replication proteins [BR:
pbw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D172_014485
DNA repair and recombination proteins [BR:
pbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D172_014485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
SHOC1_PDDEXK_dom
DUF5863
Motif
Other DBs
NCBI-ProteinID:
ALQ09154
LinkDB
All DBs
Position
complement(3275714..3276337)
Genome browser
AA seq
207 aa
AA seq
DB search
MVKKLLTRYLKRRKLLGKNALQQRYLVIDLELTGLDAKQHEIVLVAWVVIDNQCIKMSES
QHIINKDVISLEQSPVYHGINDDAVAKGQSLHSILTQLSSHFSDCILVFHNAMLDWGFLK
IALKNANITTRPKLILDTLHIEKKRLLNHSSEIKQDDLTLNACRIRYELPSYHCHHALTD
AQATAELLLAQCHQISRGKELKVGELT
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaagctgctcactcggtacttaaagcgccgtaaattactaggcaaaaatgcc
ttgcaacagcgttacttagtgattgatttagagctcactggccttgatgcaaaacagcac
gaaattgtattggtagcgtgggtggtaatagataatcaatgtataaaaatgagtgagtcg
cagcacattatcaataaagacgttataagcctcgaacaaagccctgtttatcacggtata
aatgatgatgcggtagcaaaagggcaaagtttacacagtatactaacgcaactaagtagc
cactttagtgattgtattttagtgtttcataatgccatgctcgattggggctttttaaaa
atagccctaaaaaatgccaatataacaacgcggcctaaactgatactcgacaccctccac
atcgagaaaaagcgtttactcaaccattcatctgaaataaagcaagatgatttaaccctt
aatgcctgtcgtatacgttatgagttaccaagctatcattgtcatcatgcactgaccgat
gcacaagccactgccgagttactgctagcccagtgccatcaaataagccgtggtaaagag
ctaaaagtaggcgagttgacgtag
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