Pseudoalteromonas sp. Bsw20308: D172_015125
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Entry
D172_015125 CDS
T04175
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbw03009
]
D172_015125
Enzymes [BR:
pbw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
D172_015125
Ribosome biogenesis [BR:
pbw03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D172_015125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ALQ09271
LinkDB
All DBs
Position
3428045..3428743
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AA seq
232 aa
AA seq
DB search
MKYPCRLDKFISHLAEMPRTQARASIKRKEVSVNGEIITSHNFQLSQQDEVLHQGIPLVF
LGKRYYMLNKPVGYVCANSDELHKTVFDLLDEPNMSDFHVAGRLDIDTTGLVIITNDGDW
SHKITSPKSNKFKTYLVETQEPITDEALEQLRTGVMLHNEKDLTRPAIAERLANYGLRLS
ISEGKYHQVKRMLYAVDNKVVELHREKIAGIKLDENLASGKYRLLTADEIKL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacccttgccgcttagataaatttattagccacttagctgaaatgccacgcacg
caagcccgcgctagtattaagcgaaaagaagtaagcgttaatggcgaaataattacctca
cataactttcagctatctcagcaagatgaagtactgcaccaaggtattcctttggtattt
ttaggtaagcgctattacatgctaaataaacctgttggctatgtatgcgctaatagtgac
gagctacacaaaaccgtttttgacttacttgatgagccaaatatgagcgactttcacgta
gcaggccgccttgatatagacaccacaggattagttattattaccaatgatggcgattgg
tcacataaaatcacgtcacctaaaagtaataaatttaaaacctacttagtcgaaactcaa
gagcctataaccgacgaagcgcttgagcaattacgaacaggtgtcatgctccataacgaa
aaagatttaacccgcccagctattgccgaacgacttgctaattacggactgcgtttatca
ataagtgaaggtaagtatcatcaagttaagcgtatgctttacgcggtagataacaaagtg
gttgaattgcaccgtgaaaaaattgcaggtattaaattagatgaaaacttagcaagtggt
aagtatagattactaacagctgatgagattaaattataa
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