Pseudoalteromonas sp. Bsw20308: D172_016050
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Entry
D172_016050 CDS
T04175
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw03030
DNA replication
pbw03410
Base excision repair
pbw03420
Nucleotide excision repair
pbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D172_016050
03410 Base excision repair
D172_016050
03420 Nucleotide excision repair
D172_016050
03440 Homologous recombination
D172_016050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbw03032
]
D172_016050
03400 DNA repair and recombination proteins [BR:
pbw03400
]
D172_016050
Enzymes [BR:
pbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D172_016050
DNA replication proteins [BR:
pbw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D172_016050
DNA repair and recombination proteins [BR:
pbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D172_016050
NER (nucleotide excision repair)
GGR (global genome repair) factors
D172_016050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
ALQ09444
LinkDB
All DBs
Position
complement(3664769..3667504)
Genome browser
AA seq
911 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVINMLKSLIRQYDPSHMVV
IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEADDVIGT
FARIASEQKRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPLTVVEKFGVGPELIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLEKYGSLQGVMDHASEIKGKIGEKLAAALDHLPLSY
ELATIKCDVEVESDLETFKLQEPNKDELIALYGECEFRRWLAELLDNPKDAETHLAVPTE
ATELPKVEDAHYETILTQAQFDTLIEQLNSAELFAFDTETTSLDYMKAQLVGMSFAVKAG
EAVYLPLAHDYPGAPDQLSLEFVMQKLGPILADENKAKVGQNLKYDKSVLANAGFALNGI
KFDTMLESYVFNSVGTRHDMDSLALKYLGHKNISFEDIAGKGKKQLTFNQIELEKAAPYA
AEDADITLRLHEVLWPKIAADEKLKSVFEDIEMPLVSVISDIERTGVAIDSNMLAAHSQR
LGERLIELEKEAFEIAGEPFNLSSPKQLQVLLFEKLGLPIIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNEKTQRVHTSYHQAITATGRLSSTDPNLQN
IPIRSEEGRRIREAFIAADGYKIVAADYSQIELRIMAHLSQDKGLLNAFANGLDVHSATA
AEVFGVELDDVTTDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKGAERAAINAPMQGTAADIIKK
AMLSVNRWVHEQAPNTIKLLMQVHDELVFEIKTDCASQYTKHICELMSQAAALDVPLIVE
ADEGDNWEQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccccgaaaacccacttattttagttgatggctcgtcatatttatttcgt
gcttatcattctccgccgcatttaactaattctaaaggtgaggctacgggcgctatttac
ggcgtgatcaacatgcttaaaagcttgatcagacaatatgatccctcacacatggtggtt
atatttgatgcaaaaggcaaaacattccgtaacgacatgtatagcgagtataaggcaaat
cgtccgcctatgccggatgacttacgcacacaaatagcaccaatacacagtattatcaaa
gcgatgggttttccgctaattagcatcgaaggtgttgaagccgatgatgttattggcaca
tttgcacgtatagcatcagagcaaaaacgacatgtactcgtctccactggtgataaagat
atggcgcaacttgtaaatgaacacgttacgctcataaacacgatgaccgacagtatttca
gatccccttactgtggttgaaaagtttggtgtaggtcctgaacttattattgattactta
gcattaatgggcgataaggtcgataacatccctggtgttgaaggttgtgggcctaaaacg
gcggttaagtggttagaaaaatatggctcgttgcaaggtgtaatggatcacgcaagtgag
atcaagggtaaaataggtgaaaagttagctgcagctctcgatcatctgcctttaagctac
gagcttgcaacaattaagtgcgatgttgaagtcgaatcagatcttgaaacgttcaaacta
caagagccaaataaagacgaattaattgcactatatggtgagtgcgaattccgtcgttgg
ttagctgagttgctagataaccctaaagatgcagaaacacatctagctgtacctaccgaa
gccactgaattaccaaaagtagaagatgctcattacgaaactattttaacgcaagcgcaa
tttgatacgttaatagagcaattaaatagtgccgagttatttgcatttgatacagaaact
accagccttgattacatgaaagcgcaattagtgggtatgagttttgccgtaaaagcgggt
gaagctgtgtatttacctctagcgcatgactacccaggtgcgcctgatcaactaagcctt
gaatttgtaatgcaaaagctaggtccaattttggccgatgaaaacaaagctaaagtaggg
caaaaccttaaatacgacaaaagtgtattagcgaatgcaggttttgcgctaaatggtatt
aagtttgacaccatgcttgagtcatacgtatttaatagtgtgggtacacgccatgatatg
gactcgctagcacttaaatatctaggccataaaaatattagctttgaagatattgctggc
aaaggtaaaaagcaacttaccttcaaccaaattgaacttgaaaaagctgcgccttatgct
gcagaagatgccgatattactttgcgcctacatgaagtgctttggccaaaaatagcggct
gatgaaaagctaaaatccgtattcgaagatatagaaatgccacttgttagtgtgatttct
gatattgaacgaaccggtgtagcaatagatagcaatatgcttgcagcgcacagccaacga
ttaggcgagcgtttaattgaacttgaaaaagaagcatttgaaatagcaggcgaaccattt
aatttaagctctcctaagcaactacaagtattgttgtttgaaaagcttggcctgcctatc
atcaaaaaaacacctaaaggtgcaccttctaccgcagaagaagtattgcaagagcttgct
catgattatccactacctaaagtaattatagagcatcgtggtttatcaaagcttaaatca
acttacaccgataaattaccattaatggtgaatgagaaaacccagcgtgtacatacgtct
tatcatcaggcaattactgcaacggggcgcttgagttcaaccgatcctaatttacaaaat
attcctattcgttcagaagaagggcgtcgaattcgtgaagcgtttatagctgcagatggt
tataaaattgtcgctgccgattatagtcaaattgagctgcgcattatggcgcacctttca
caagacaaaggtttattaaatgcatttgctaacggcttagatgtacacagtgcaactgcc
gctgaagtatttggtgtagagcttgatgatgtaactaccgatatgcgccgcaaggcgaaa
gcagtaaactttggcttaatttatggtatgtcggcatttggtttagcacgtcaactagat
gtgccacgccatgaagcgcagcattacatagataaatactttgagcgttttccaggtgta
ttagagtacatggaaacaacacgcgaaaaagcagctgaaaatggctatgttgaaacaata
tttggtcgccgcctacatttaccagaaataaacgcacgtaatggggcgcgtagaaaagga
gccgaacgtgctgctataaacgcaccaatgcaaggtactgccgccgacattattaaaaag
gcaatgctgagcgttaaccgctgggtacacgaacaagcgccaaatacaattaagctgctt
atgcaagtgcacgatgaattagtatttgaaatcaaaacagactgcgcatcacagtacaca
aaacacatctgtgaactgatgtcgcaagctgctgcgctagatgtaccacttatagttgaa
gctgatgaaggtgacaactgggaacaagctcattaa
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