Pseudoalteromonas sp. Bsw20308: D172_016475
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Entry
D172_016475 CDS
T04175
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
D172_016475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
RuvX
RNase_II_C_S1
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ALQ09520
LinkDB
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Position
3760999..3763326
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AA seq
775 aa
AA seq
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MSDISARLAGELNAQQQQVVAATKLLDEGATVPFIARYRKEVTGGLDDTQLRLLEQRLSY
LRELEERRSFILSTIESQNKLTAELKADISTAQSKTELEDLYLPYKAKRRTKGQIAIEAG
LEPLADALFKNANLDPEQQAEQFINIEKGFADIKAVLEGAKFILMERFAEDAKLLAKFRS
HISQNGAIQSTVIKGQEQAGTKYRDYFEHQELLKKVPSHRALAMLRARNEGVLQLNVNPE
PSAENSAQLCANMIAEHYRLDIKYKAASPWLLNVLQWAWKIKLGLHLENEFFAAMREKAE
AGAIDVFAKNLKDLLMAAPAGPRTTLGLDPGLRTGCKIAVVDSTGKLLATQTIFPHAPQN
HWDKSVRTLEQLCRQYKVELIAIGNGTASRESDKLVAELIKANSELKLSKIMVSEAGASV
YSASEFAANEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQLGQS
LISVVEDCVNSVGVDLNMASVPLLTRVSGLNKTLAQNIVNYRDANGTFTKRSELKKVERL
GPKAFEQAAGFLRINNGSDPLDNSSVHPEAYPVVKRICERNSVDVSNLIGNSDFLTKLAA
NDYTDEKFGLPTVTDIITELDKPGRDPRPEFKTAEFKAGVEKISDLKPGMILEGVVSNVA
NFGAFVDVGVHQDGLVHISAITNKFISDPREVVKAGDIVKVKVVEVDAARKRISFTMRLD
DEIDTSNKSAAPATQKPQARANNSQPRAAKPKRDNGNALMGNAFADAFANAKVKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatctctgcacgtttagccggtgagctaaatgcacaacaacagcaagttgtt
gctgcaacaaagttacttgatgaaggtgcaactgtgccttttattgctcgttatagaaag
gaagtaaccggtggcttagatgacacccaattacgccttttagaacagcgtttatcatat
ttacgtgaactagaagaacgccgcagctttattttatcaaccatcgaatctcaaaataaa
ttaacagcagagttaaaggcagatattagtactgcgcaaagcaaaactgaacttgaagat
ttatatctcccgtataaagcgaagcgccgtactaaaggccaaatagcaattgaggccgga
ttagagccacttgctgatgcactgtttaaaaatgctaaccttgatcctgaacaacaagct
gaacaatttataaatatcgaaaaaggctttgctgatataaaggcagtgcttgaaggtgct
aagtttattttaatggagcgctttgctgaagacgcaaaactacttgctaaatttagaagc
cacattagccaaaatggcgcaattcaaagtaccgttattaaaggccaagaacaagctggc
actaaataccgtgattactttgaacaccaagagcttctaaaaaaagtaccttcgcatcgc
gcacttgcaatgctgagagctcgaaatgaaggtgtacttcagttaaatgttaaccctgag
cctagtgctgaaaattcagcgcaactttgtgccaacatgattgctgagcattaccgttta
gatattaaatataaagcggcaagtccttggttattaaacgttttgcaatgggcgtggaaa
attaaattagggctgcatttagaaaacgaattttttgcagccatgcgcgaaaaagcagaa
gctggtgcaatcgacgtatttgctaaaaacttaaaagatttattaatggcagcacctgca
ggccctcgtactactttaggtcttgatccaggccttcgaactggctgtaagattgccgtt
gttgatagcacaggtaaattactagctacacaaactattttccctcatgcaccacaaaat
cattgggataaatcagtgcgtacgttagagcaactttgtcgtcagtataaagttgagcta
attgcgattggtaacggtactgcatcacgcgagtcagataagttagttgctgaacttatc
aaagcaaacagcgaacttaaacttagtaaaattatggttagcgaagcgggtgcatcggtt
tactcagcttctgaatttgcagctaatgaatttccagatttagatgtttctatacgcggc
gctgtttctattgcgcgccgcctacaagatcctcttgctgaacttgttaaaattgagcca
aaatcaattggtgttggccaataccaacacgatgtatcgcaaagccaattaggccaaagc
cttatctccgttgtagaagactgtgtaaactcagtaggcgtagatttaaacatggcatcg
gtaccgctacttacacgcgtatctggtttgaacaaaacattagcgcaaaatatcgttaat
tatcgcgatgctaacggcacatttactaaacgtagtgagcttaaaaaggttgagcgttta
gggccaaaagcatttgaacaagcggctggttttttacgtattaacaatggtagcgatccg
ctagataactcatcagttcaccctgaagcttatcctgttgttaaacgtatttgtgaacgc
aatagcgtcgatgtcagtaacctaattggtaacagcgactttttaactaaacttgctgct
aacgattacactgacgaaaaatttggcttaccaaccgttaccgacattattactgagctt
gataaacctggtcgagatcctcgccctgaatttaaaacggctgaatttaaagccggtgtt
gaaaaaattagtgatttaaaaccaggtatgattttagaaggcgtggtttcaaacgttgct
aattttggtgcgtttgttgatgtaggtgttcaccaagatggtttagtgcatatttcagca
atcacgaataaatttatatcagatccgcgtgaagttgttaaagctggtgatattgtaaag
gttaaagtagttgaggtagacgctgcacgtaagcgcataagctttactatgcgcttagat
gacgaaattgacacaagtaataagtcagcagctccagctacgcaaaagccacaagcacgt
gctaataattcgcaacctcgtgctgcaaagcctaaacgtgacaatggtaatgcgttaatg
ggtaatgcatttgccgatgcgttcgctaatgctaaagtaaaaaaataa
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