Pseudoalteromonas sp. Bsw20308: D172_018345
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Entry
D172_018345 CDS
T04175
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbw03000
]
D172_018345
Transcription factors [BR:
pbw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
D172_018345
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_23
HTH_3
MerR
HTH_17
AP_endonuc_2
HTH_Tnp_ISL3
DUF6930
TetR_C_1
Motif
Other DBs
NCBI-ProteinID:
ALQ10046
LinkDB
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Position
pPBSW1:243857..244873
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AA seq
338 aa
AA seq
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MSVTINDVARLSGVSKRTVSRVINCSPAVGEATRERVLEIIKETGFSPDKQARGLASSRS
YLLGLIYDNPDALYIDQVQRGALSVCAELGYELVVHPGSSKHEDFIDDCLRFISRSKLDG
VIILPPVSENKALAAALREAQCPYVRLASVDLDDADNIVVSDERAAMRDMASHLVELGHT
DIGFISGPQHFRSSTERLAGFLAELQVYNVQLPDSRIVEGKNNYESGLMCAQTLLDTPNR
PTAIVANNDEMAAAALRVASNLNIKVPDELSVAGFDDNILASRIIPSLTTIRRPVYNMAC
LAVQKLINKSRATKEKLPLQKTVTPTLVKRESTGQCSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaacgatcaatgatgtagcacggctttcaggtgtttcaaaacgtactgtttct
cgcgtaattaactgctcaccagcagtaggtgaggcaacgcgtgagcgggtactggaaata
attaaagaaacaggcttttcaccagataagcaggctcgtggactcgcatctagtcgttct
tatttattaggactaatttatgataaccctgatgcgctttatattgaccaagtacaacgc
ggtgctttaagtgtgtgcgccgaactgggttatgagctagttgttcaccccgggtcgtca
aagcatgaggactttattgatgattgcttacgttttatttcacgctcaaaattagatggc
gtgattatcctaccaccagtatctgaaaataaagcacttgcggcggctcttcgtgaagca
caatgtccttatgtacgccttgcctctgttgatttagatgatgcagacaatatagttgtc
tcggatgagcgtgcagccatgcgtgatatggcaagccatttagttgaacttggtcatacc
gatattggttttatttctgggccgcaacattttcgttcatctactgagcgtttagccggt
tttttggctgagttacaggtttacaatgtgcaactaccagacagtcgtattgtggaaggg
aaaaataattacgaaagtggcttaatgtgcgcacaaacactgttagacacgcctaataga
ccaacagctattgtagctaataatgatgaaatggccgcagcggcattacgcgttgcaagt
aacttaaatatcaaagtacccgatgagctttcagttgcaggatttgatgataatatttta
gcgtcgcgcattattccttcgttaacgacgattcgtcgacctgtttataatatggcatgt
ttagcagtacaaaagttaataaataagtcacgtgcaacaaaagaaaagttaccacttcaa
aaaacggttacgcccactttagttaagcgagagtcgacagggcaatgtagcgaataa
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