Pseudoalteromonas sp. Bsw20308: D172_018365
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Entry
D172_018365 CDS
T04175
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K15532
unsaturated rhamnogalacturonyl hydrolase [EC:
3.2.1.172
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
D172_018365
Enzymes [BR:
pbw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.172 unsaturated rhamnogalacturonyl hydrolase
D172_018365
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Gene cluster
GFIT
Motif
Pfam:
DUF4861
Glyco_hydro_88
Motif
Other DBs
NCBI-ProteinID:
ALQ10050
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All DBs
Position
pPBSW1:complement(248916..251468)
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AA seq
850 aa
AA seq
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MTINAPLKQFALTSGAIIFASLFLSACQQKESTAALPTLKKAPPLAQIEISNPSDFARPD
EPIYVSYYDLGLTSKEALSVFSADVKLPSQAVDIDYDGTVDGLYFVVDLNNSTPVSITIE
NTPVSVKPVDKVKRVQADLAHKVAGQWHPHSRPPKHQINTGKKEYVGGHFENVKSLTPPD
YYTDHSNWIRYEGPGIESDKVGYRFYLDWRNGFDIFGKLTPEPVLHQVGLDGYESYHHKA
RWGMDILKVGSSLGAGGFGVMNTKNQLEHVANVKTRTARIVENGDLRASVQLDYNDWKSS
YNQQNLVADISMHAGSRLANVALKLSKDLPNMATGIVKHENTVFIQGDLSNLSNYGYSYI
ASWGKQSLDKSPLGMAIFFKKGDLKKVTEDKNNYLAILEPKGDKSQQRVNYYFASVWQPE
SGINSKDAFIDYLNKEAEKLTQKPRLRIKTRLSAAQFKAPLDAKSALKWTQALADTELSH
KVLGYHYMGWDVNRKRLPKFEYDIIGIQPYAYNQLALLTGKKQYSEVIEKVTASFISDQG
KIYAYKKSNFNIDNIPPGQNLISLYERTGEAKYRVAIETLREQLHDQPRTSAGAFWHKKK
YQGQVWLDGVYMGMPFLAHYAKKFELGHKQQETLNEVVNEFKLTREFLRDSNTGLYYHAW
DELKAQSWADKNTGLSQEFWARGMGWLAMAVVDVLDYIPTENIEQRDFLVTMIGEIAVSL
KSVQDQNTGTWWQILNKPAQRGNYRESSATAMFIYFYAKAINKGYLAKEYTALVKSAYKG
LLSEFTLVHKDGTVSMLNQCYVAGLGFGRDGSYDYYMSEPISRNDPKGVAPYILAGIEMV
KLLGIDNSVK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgacaataaacgcccctttaaaacagtttgcactcacatccggtgctattatttttgca
agtttgtttctatcggcttgccagcaaaaagaaagcactgcagcattaccaacacttaaa
aaagcgccccctttagcacaaatagaaatcagtaacccctctgattttgcacgtcctgat
gagcctatctacgtgagctactacgatttaggcctcacatcaaaagaagcactcagcgtt
ttcagtgctgatgtgaaacttccaagtcaagcagttgatattgactacgatggcactgtt
gatggactttactttgttgttgatttaaataacagcacacctgtcagtattactattgaa
aatacacctgttagtgttaaacctgtcgataaagtaaaacgagtacaggcagatcttgcc
cataaagttgctgggcaatggcatccacatagtcgcccccctaaacaccaaataaataca
ggtaaaaaagaatacgttggaggtcattttgaaaatgttaaatcacttacaccgccagat
tactatacggaccattcaaattggatacgctatgaaggacccggtattgaatcagacaaa
gtaggctatcgcttttatttagattggcgaaatggctttgatattttcggtaaattaaca
ccagaacccgtgttacaccaagttggcttagatggatatgaatcttatcatcacaaagca
cgttgggggatggatatccttaaagtaggaagctctctcggtgcaggcggctttggtgta
atgaatacaaaaaaccagcttgagcacgtcgccaatgtaaaaacacggacagcacgcatt
gtcgaaaatggcgatttacgcgcgagtgtacagctagattataacgactggaaaagctca
tataatcaacaaaatcttgttgctgatattagtatgcatgcaggttcacgcctagcaaat
gtagcactaaagctaagtaaagatttaccgaatatggctacaggcattgttaaacatgaa
aatactgtgttcatacaaggtgatttaagcaacttaagtaactatggctatagctatatt
gctagttggggtaaacaaagcttagataaatcaccacttggtatggctatttttttcaaa
aaaggcgatctaaaaaaagtaaccgaagataaaaacaactatctcgcgatacttgagcct
aaaggggataaatctcagcaacgtgttaattactattttgcttcagtgtggcaaccagaa
agcggcataaatagtaaagatgcttttattgattatttaaacaaggaagccgaaaaatta
acacaaaaaccacgtttacgaattaaaacgcgtttatcagcagctcaattcaaagcacca
cttgatgcaaaaagtgctttaaagtggacacaggcattagctgacaccgagctttctcat
aaagtacttggttatcactatatgggctgggatgtaaaccgtaaacgcttaccaaaattt
gaatacgatatcattggtattcagccttacgcatataatcagttagctctattgaccgga
aaaaaacagtacagcgaagtcattgaaaaagtaaccgcgagcttcatttctgatcaaggt
aaaatttatgcgtataagaaaagtaacttcaatattgataacatcccccccggccaaaac
ttaattagcttatatgagcgtactggtgaggctaaataccgtgtagctattgaaacactt
agagaacaattgcacgatcaaccacgcacctctgctggtgctttttggcataaaaagaaa
taccaaggtcaagtatggttagatggtgtttacatgggtatgccatttttagctcattat
gcaaaaaaattcgagcttggtcataaacagcaagaaacgcttaatgaagtagtcaacgaa
tttaaacttactcgcgaatttttacgcgactcaaatacagggctttactaccatgcatgg
gatgagctaaaagcacaaagttgggctgataaaaacacaggattgtcgcaagaattttgg
gctcgcggcatgggctggttagccatggctgttgttgatgtactggattatattccgaca
gaaaatatcgagcagcgtgattttttagtcacaatgattggtgagattgccgttagcctt
aaaagtgttcaagatcaaaacaccggaacatggtggcaaatacttaacaaacctgcgcag
cgcggtaattaccgcgagtcgtcagccacagcaatgtttatttacttttatgccaaagca
atcaataaaggctacttagctaaagaatatactgctttagtaaaatcagcttataaaggt
ttactcagtgaatttacccttgttcataaagatggaactgtttctatgctaaatcaatgc
tacgtagcagggttaggttttggtcgtgatggaagctatgactattacatgagcgaacct
attagccgtaacgatcccaaaggtgttgcaccatacattttggctggtatcgaaatggtt
aagctactaggtatagataactcagtaaagtaa
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