KEGG   Pseudoalteromonas sp. Bsw20308: D172_019820
Entry
D172_019820       CDS       T04175                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
pbw  Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:pbw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbw03400]
    D172_019820
Enzymes [BR:pbw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     D172_019820
DNA repair and recombination proteins [BR:pbw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D172_019820
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Tc-R-P XPG_I_2 POTRA_2
Other DBs
NCBI-ProteinID: ALQ10319
LinkDB
Position
pPBSW1:594628..596544
AA seq 638 aa
MIGIIKQLFSATGPLALSLDGYTPRQPQIDMAVAVADALKNSSQLVVEAGTGTGKTFAYL
APALKSKGRTIISTGSKALQEQLYHRDLPQLVKALSASKKTALLKGRANYLCTYRLNQHV
AHVPTDDSDVMHQLAMVAKFASETQSGDLADCIGIEDDAKVLPYVNSTADNCLGKECPDF
QSCYIRKARLTAADADVVVINHHLFFADMAVKESGFAELMPKADAYIFDEAHQLSEIASD
YFGESVSTKKLVDLINDLRAIYRAEIPDMLQLGKSLNKLETSVADLRLQFGVDGGRGDWR
EKLSDKQICAALHRVISDLDFVYQVLKLCLDRSDKIEHPFERALAFKGQLERVFDTAQTG
FSYWYETTRRYLTINITPLNVSAKFAQMMQDTGAGFVFTSATLSVDNKLAHFNASLGLKP
KQSMMVDSPFDYPNQALLCLPRYLPESHADNMPHAIVKLTLELIKSAQGRCFVLFTSYRM
MHLVAEGLTTQIDYPVYMQGQMSKRIILEKFTRHGNAVLLGTASFWEGVDVRGSTLSCVI
IDKLPFAAPDDPLLQAKMQDCQMQGKDPFAHIQLPQAVIALKQGVGRLIRDSKDKGVLVI
CDNRLVTRQYGQVFLKSLPPMRRTRSLEDANKFLQQIN
NT seq 1917 nt   +upstreamnt  +downstreamnt
gtgattggtattatcaaacaactgtttagcgcaaccggacctttggcgttgtctttagat
ggatacactcctcgccaacctcaaatagatatggctgtcgccgttgctgatgcattaaaa
aacagttcgcaattggtcgttgaagccggtactggtacgggtaaaacgtttgcatattta
gccccagcacttaaatcaaaaggccgaacgataatatcgacaggctctaaagccctacaa
gagcagctgtaccatcgcgatttacctcaattagtgaaagcgctcagcgcctctaaaaaa
acggccctattaaaaggtcgtgcaaactatctatgtacatacaggcttaatcagcatgtt
gcacatgtacctacggacgactctgatgttatgcatcaactagccatggttgctaaattt
gccagcgaaacgcaatcaggcgatttagctgattgtattggtatagaagatgatgccaaa
gtactgccttatgtaaattcaacagccgataattgtttaggtaaagaatgcccagacttt
caaagttgttatatacgcaaagcacgtttaactgcggccgatgccgatgttgtcgtgatt
aaccatcatttgttttttgccgatatggccgtaaaagaaagcggctttgccgagcttatg
ccaaaagcagatgcttacatatttgatgaagcccatcagttaagcgaaattgccagcgat
tactttggtgaaagtgttagcactaaaaagctggtggacttaattaatgacttacgtgct
atttatagagccgaaattcccgatatgctgcagctcggtaaaagcttaaataagcttgag
acaagcgttgctgatttacgattacagtttggcgttgatggcggccgtggcgattggcgt
gaaaagctcagtgataaacaaatatgcgcagcacttcatcgtgtcataagcgatttggac
tttgtttaccaagtacttaagctttgcctagacagaagcgataaaatagaacaccctttt
gagcgtgcactcgcttttaaaggccaattagagcgggtttttgatacggctcaaaccggc
tttagttattggtatgaaacaacgcgccgttatttaacgattaatataacgccattaaat
gtatcagctaagtttgctcaaatgatgcaagacacgggcgcaggttttgtattcacttca
gcaacactttcggttgacaacaaactagcgcattttaatgcaagcctaggtttaaaacca
aaacaaagcatgatggtagatagcccatttgattaccctaatcaggcgctgctgtgttta
cctcgctacttacccgaatcacacgctgataatatgccccatgcaattgtaaaattaacg
cttgagcttataaaatcagcacaagggcgttgttttgtattatttactagctatcgaatg
atgcatttggtagccgaagggctaactacacaaatagactacccagtttatatgcaaggg
caaatgtctaagcgtattattttagagaaatttacccgccatggtaatgcggtattactc
ggcacggcttctttttgggaaggtgttgatgtacgcggcagtacgttaagttgtgttatt
attgataaattgccatttgcagcacccgatgacccattattacaagctaaaatgcaagat
tgccaaatgcaggggaaagacccttttgcgcatatacaattgccacaagctgttattgca
cttaaacaaggtgttgggcgtttaatacgcgatagcaaagataaaggtgtacttgtcata
tgtgataatcgcttagttacacgacaatatggccaagtatttttaaaaagcttaccgcca
atgcgccgaacacgaagtttagaagatgccaataaatttttacaacaaattaattag

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