Pseudoalteromonas sp. Bsw20308: D172_020975
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Entry
D172_020975 CDS
T04175
Name
(GenBank) LysR family transcriptional regulator
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbw03000
]
D172_020975
Transcription factors [BR:
pbw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D172_020975
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
MarR_2
PBP_like
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
ALQ10537
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Position
pPBSW1:complement(866823..867701)
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AA seq
292 aa
AA seq
DB search
MNLHALRVFYTVAKLGSFSGAAEALFISQPAVSKALKELEHQLNIQLIERASKGKKLTLS
DGGQALYDHARSIFAIEKAAIEDIKSRTGLKRGTLVIGTSTTIASYWLPPYLAKFCAQYP
DIKVEVQVANTAQIEHAILECTIDLALVEGTPTEPHILSKHWQNDLMSVVIPSNLKPAKN
LKAWLNNQFWLLREPGSGTLEMSVKLLAEHGVIAERSMQLGSNEAIARAVAQGMGVALLP
NVVTEDLVQLGKLTRLKQPSNVELSRPLYQLHYKDRPSSHAAQAFEKSLFSE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgcatgcacttagggtgttttatacggtagcaaagcttggtagtttttcaggc
gcagccgaggcgctttttataagccaacccgctgtatctaaagcgctaaaagagcttgag
caccaattaaatattcaacttatagagcgtgcatctaaaggcaaaaaacttaccttaagc
gacggcggccaagccttgtatgatcatgcacgtagcatttttgccattgaaaaagccgcc
attgaagatattaaatcacgcacagggcttaagcgtggcacgctcgttataggcactagt
acaaccattgccagctattggctaccgccctatttagctaaattttgcgcgcagtaccca
gatataaaagtagaagtacaagtggctaatacagcgcaaattgagcacgccatacttgaa
tgcactatcgatttagcactggttgaaggcacacctaccgagccgcatatattaagtaag
cactggcaaaacgatttaatgagtgttgttataccgagtaacttaaaacccgctaaaaac
ttaaaagcatggttaaacaatcaattttggctactgcgcgaacctggctcgggtacttta
gaaatgtcggttaagttattagcagagcatggcgtaatagcagagcgcagtatgcaattg
ggcagcaacgaggctatagcaagagcggtagcacaagggatgggcgttgcgttattgcct
aatgtggtcactgaagatttagtgcagttaggtaaattaacacggctaaaacagccaagt
aacgtcgagttatcaagaccattataccaattacactacaaagacagaccctcttcacat
gctgcgcaagcattcgagaaaagcctatttagtgaatga
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