Pieris brassicae (large cabbage white): 123706576
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Entry
123706576 CDS
T08632
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123706576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbx03041
]
123706576
Spliceosome [BR:
pbx03041
]
Complex A
U1 snRNP components
U1 related factors
123706576
Complex B
123706576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
DTW
SSL_OB
Motif
Other DBs
NCBI-GeneID:
123706576
NCBI-ProteinID:
XP_045511812
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All DBs
Position
2:18289331..18300679
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AA seq
831 aa
AA seq
DB search
MDASKTSSPGMMASAPLIPPPMIGGIPPPMPPAVAMPPVPGMAPNMGAIPPPMAFPPMMA
SFTMPPPGFPPFKPDLNAPAPEISPMANQTSPWSEHKAPDGRTYYYNSITKQSLWEKPDD
LKTPAEKLLSSCVWKEYTTDAGRVYYHNIETKESSWVIPKELQEIKEKIEAEEAAQAGLH
ADMTAGEVPLPSSPALLSQTGSSAMDEAMAKTLASIDPSLTNAIPIPDEMYYTVKPEEIA
APPAQVNGEPTEQPLELQYKDKKEAIEAFKELLRERNVASNATWEQCVKIISKDPRYQSF
KKLNEKKQAFNAYKTQKLKDEREEQRLKTKKNRENLEEFLLTCDRVTSLTKYYKCEDMFG
NLEIWRCVPESDRRDIYEDCIFTITKREKEEAKVLKKRNMKMLAQVLENMNEITYSSTWS
EAQVLLLENSAFKNDVSLLGMDKEDALIVFEQHIRNLEAEFVQEKEQIKKRNKRQQRKNR
DNFLALLDGLHEEGKLTSMSLWVELYPVISADMRFSAMLGQSGSTPLDLFKFYVENLKAR
FHDEKKVIKEILKEKQFEVKADTTFEEFATIVCEDSKSASLDAGNVKLTYNSLLEKAETK
NKEKIKEESKAQKKIESSFKWALSEAEVDHTQSWSEVREKLDLNAAEFTAVPDEEDRQRI
YKDYQHEQEDSCMHYHHPKPKKAKRSKKKKRSRSHSLSVSRSVSPVESRERERESSLEKG
EVARSPTPPPSPPDDEDKKHKKSKKKHKKHSPPPKSPTPEEGGISEEEVRPKKKSKRSAP
SSPEEDVSHKPKKKKDKKDKKERSGGAVWSDAELESRRAALLAQLHEQEAD
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcaaaaaccagctctcctggaatgatggcttcggccccattgatacctccg
cctatgatagggggcataccaccacctatgccgccagccgtggctatgccccctgttcca
ggaatggcaccaaacatgggtgctattccaccaccaatggcttttcccccaatgatggcg
tcttttactatgcctccgcctgggtttccaccatttaaacctgacttgaatgcaccagca
cctgaaatatcaccaatggccaaccaaactagtccatggtcagagcacaaagctcctgat
ggacgcacatattattataattcaatcactaaacagagcctctgggaaaagccagatgat
ttgaaaactcctgcagagaaattattatcatcttgcgtttggaaggaatatactacagat
gctggtcgtgtttattatcacaatatagagacaaaagagtcaagttgggtcattccgaaa
gaattgcaagaaattaaagaaaaaattgaggcagaggaagctgcacaggcaggactacat
gctgatatgacagctggagaagtgcctttgccatcttctcctgcactattatctcaaaca
ggaagttcggctatggatgaagcgatggccaaaactctggcctccattgacccctcattg
acaaatgctatcccgataccagatgaaatgtactacacagtcaaacccgaagaaatagca
gctccccctgctcaagttaatggagaaccaacagagcaaccgctcgagttacagtacaag
gataaaaaagaggccattgaggctttcaaggaattactacgggagaggaatgtggcatca
aatgctacttgggagcaatgtgtgaagataatctctaaagacccgcgctaccaatcattt
aagaaattaaatgaaaagaaacaagcatttaatgcatataaaacccaaaaactaaaagat
gaaagagaggaacagaggttgaaaacaaagaaaaacagagaaaacttagaagagttttta
ctaacctgtgatcgtgttacttctctcaccaagtattacaagtgtgaagatatgtttgga
aatctcgagatttggcgctgtgtacctgaatcggaccgtcgtgatatctacgaagattgt
attttcacaatcaccaaacgtgaaaaggaagaagctaaagttctaaagaaacggaatatg
aaaatgttagcccaggtactggaaaatatgaatgaaataacatacagcagtacgtggagc
gaggcacaagtgttgcttctagaaaattctgcatttaagaacgacgtgagcttacttgga
atggataaagaagatgctcttatagtttttgaacaacatatacgaaatctggaggcagag
tttgtgcaagaaaaggagcagattaagaagaggaataaacgtcaacagagaaagaacaga
gataattttttggctctactcgatggtctccacgaagagggaaagttgacgtcgatgtct
ttgtgggtggaattatatccagttatttctgctgatatgagattttcggccatgcttggt
caaagcggttcaacaccattagacttatttaaattttacgtagaaaatctaaaagcgcga
ttccacgacgagaagaaggttatcaaggaaattcttaaagaaaagcagtttgaggttaag
gccgatacgacgtttgaggaattcgcgactattgtctgtgaagatagcaaatcggcgtcg
ttggatgctggaaatgttaaactaacctataactcattgttggaaaaggcggaaacaaaa
aacaaagaaaagataaaagaagagtcaaaagcgcagaagaagatagagagttcatttaaa
tgggcgttgagtgaagccgaagttgatcacactcagtcgtggagtgaagttcgtgagaag
ctcgatttgaacgcagccgagttcacggcagtgccagacgaagaagatcgccaacgaata
tataaggattaccaacatgaacaagaagacagctgtatgcactatcatcatcccaaaccc
aagaaagcgaagaggtcaaagaaaaagaaacgttcgcgttctcattccttgtcagtatca
cgatcggtgtcccccgtggagtcccgagagcgggagcgcgagagttcgctagagaagggc
gaagttgcccgctcccccaccccgcctccctctccgccagacgacgaagacaagaagcac
aagaagtccaagaagaaacataagaaacattcgccacctccgaagtccccgacaccggaa
gaaggtgggatttcagaggaagaggtccgtcccaagaaaaaaagtaagcgctcagcaccc
tccagtcccgaagaggacgtctcgcataaaccaaaaaagaagaaagataaaaaagacaaa
aaagaaaggtcgggcggcgcggtgtggagcgacgcggagttagagtcgcggcgcgcggcg
ctgctcgcccagctccacgagcaggaggctgactga
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