Pieris brassicae (large cabbage white): 123706666
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Entry
123706666 CDS
T08632
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03020
RNA polymerase
pbx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123706666
09124 Replication and repair
03420 Nucleotide excision repair
123706666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123706666
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123706666
Enzymes [BR:
pbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123706666
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123706666
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123706666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123706666
NCBI-ProteinID:
XP_045511934
LinkDB
All DBs
Position
3:complement(3831432..3835366)
Genome browser
AA seq
1176 aa
AA seq
DB search
MYDTEEDQYEEEDVEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPPIELQAEAQHSSGEIEIPPKYHLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKENEDPIETQHQKTFIGKIPIMLRSTYCLLSNLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIVAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQ
KFIDKGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDQLKERDYNNYGWQNLVASG
VVEYIDTLEEETVMIAMSPDDLAQVKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDEDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTKRFSKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatacagaagaagatcagtatgaggaggaagatgtggaagaaatatcatcagaa
ttatggcaggaagcttgctggatagtaattaacgcgtatttcgatgaaaagggtctagtg
aggcagcaactagacagtttcgacgagttcatacaaatgtccgtacaaagaattgttgaa
gattctcctcctattgaactccaggctgaagcacaacattcttctggcgagatagaaatt
ccacctaaatatcatttgaagtttgaccagatttacttatccaagccaacacattgggaa
aaagatggagctccatcaccaatgatgcctaatgaagcacgtttacgtaatttaacttac
tctgcgcctttatatgtcgacattactaaaacaattgttaaagaaaatgaagatcctatt
gaaacacagcatcaaaaaacttttattgggaaaattcccattatgttgagatctacttac
tgtttgcttagcaatcttactgaccgagatttgactgaattgaatgagtgtcccctggat
cctggtggctatttcattataaatggctcagaaaaggtgttgattgctcaagaaaaaatg
gcaacaaatacagtatatgttttcagtatgaaggatggaaagtatgcttacaaaactgaa
attcgttcctgtttggaacatagctctagaccaacatctaccctttgggttaatatgatg
gctcgtggtggacaaagcataaaaaagtcagctattggtcaaagaattgttgcaattgtt
ccatacattaaacaagagattcctattatgattgtattcagagctcttggttttgtagct
gacagagatattttggaacatattatttatgactttgatgatcctgaaatgatggaaatg
gtaaaaccttccctagatgaggcatttgttattcaagaacagaatgtggctctaaacttt
attggagctagaggagcaaggcctggtgtgactaaagaaaggcgtataaaatatgctaga
gaaattttacaaaaggaaatgttacctcatgttggtgtttcagatttttgtgagactaaa
aaagcttatttcttgggctacatggtacataggttacttctagctgctttaggtcgcaga
gaacttgatgacagagatcattatggaaataaaaggttggatttagccggaccattgtta
gcttttctgtttcgtggattatttaagaatttacttaaagaagtaaggatgtatgcacag
aaatttattgataaaggcaaagacttcaatctcgaattagctattaaaacaaaaattatc
acagatgggttaaggtactctcttgctactggtaactggggtgaccaaaagaaagcgcac
caggctagagctggtgtatcacaagtgttaaatcgattgacatttgcatcaacattatca
catttgcgaagagttaactcaccaattggccgtgatggcaaattagctaagcctcgacaa
cttcacaatacactttggggtatgatttgtcctgctgaaacgccagaaggtgcagctgta
ggtcttgtaaagaacttggcactaatggcttatatttctgttggaagtcagccatcacca
attttggagttcttggaggagtggtctatggagaatttggaagaaatagcaccgtcagct
attgcagatgctacaaaaatatttgtaaatgggtgttgggtaggaatacatagagaccca
gaacaattaatggctactttgagaaaactgagacgtcaaatggatataattgtatctgaa
gtcagtatgatccgtgatattcgtgacagagaaataagaatttatactgatgcaggaaga
atttgtcgtccattattgattgttgaaaatggagctcttttgcttaagaaaaagcatatt
gatcagttgaaggaaagagattacaataactatggttggcaaaatttagtagcaagtggt
gttgttgaatacattgatactttagaagaggagacagttatgattgctatgagccctgat
gatttggctcaagttaaagaatatgcttactgtacaacttatacccattgtgaaatccat
ccagctatgatattaggagtttgtgcatcaattattccttttcctgatcacaatcaaagc
ccaagaaatacatatcagagtgctatgggtaaacaagctatgggagtgtatattaccaat
ttccatgtaagaatggacactttagcacatgtgttgtattatccacacaaaccactggtc
acaacaagatctatggagtacttgcgtttccgtgaattaccggctggaatcaattctatt
gttgctattttgtgctacacaggatacaatcaggaagacagtgtcattttgaatgcttca
gctgttgaaagaggattctttagatctgtcttctatagatcttacaaagactctgagtct
aagaggattggtgatcaggaagaacagtttgaaaagcctactagacaaacatgtcaagga
atgagaaatgccctgtatgacaagctggacgaagatggcattatagctccaggtatcaga
gtatcaggagatgatgttgtgattggaaaaactattactttaccggaaaatgatgatgaa
cttgagggaacaacaaaacgtttctcaaaaagagatgcatcaacgtttttgcgtaacagt
gaaactggtatcgtcgatcaagtcatgttgacattgaacagtgaaggttataaattctgt
aaaattagagtacgttcagtgcgcattccccaaattggcgataagttcgcctctcgccac
gggcaaaagggaacatgtggaattcaatacagacaagaagacatgcctttcacttgtgaa
ggattaacacccgacattatcattaacccgcacgctatcccatctcgtatgacaattggt
cacttgattgaatgtattcaagggaaagtatcgtcgaacaaaggcgaaatcggtgacgca
actccctttaacgacgcagtaaatgtgcaaaaaatttcatctttattacaagaatacggt
tatcacctacgtggtaatgaagtaatgtacaatggacacaccggaagaaagataaatgct
caggtgttcttggggcctacttattaccagcgtcttaagcacatggtggatgacaaaata
cattcacgagctagaggacctgtgcagattttggttcgacaacctatggagggaagggca
agggacggcggtctccgttttggggaaatggagcgtgattgtcaaatcgctcacggcgca
gcgcaattcttacgagagagactatttgaggtatcagatccatacagaatccacgtctgc
aacttctgcggtctcatagctattgcaaatcttagaaataacacttttgaatgtaaagga
tgtaaaaacaaaacccagatttcacaagtaagactaccctatgccgcgaaattattattc
caagaattgatgtctatgaatattgcgccaaggcttatggtagttaattaa
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integrated database retrieval system
