Pieris brassicae (large cabbage white): 123706828
Help
Entry
123706828 CDS
T08632
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123706828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123706828
03036 Chromosome and associated proteins [BR:
pbx03036
]
123706828
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123706828
Chromosome and associated proteins [BR:
pbx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
123706828
Chromatin remodeling factors
BAF complex
123706828
PBAF complex
123706828
GBAF(ncBAF) complex
123706828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
BRK
SnAC
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
123706828
NCBI-ProteinID:
XP_045512265
LinkDB
All DBs
Position
3:4991392..5012567
Genome browser
AA seq
1643 aa
AA seq
DB search
MASPSPQNSPMPPPQAPSPMGPPTQSPAPPHSPHSPYSQHVNGPPPSHPSGSSQPPISNH
MPASGPPHNIAPNGNGPPGVSQHPNIPPNSHQMPSHMVGPHMSGPPGHPISATGAGPNGH
PNMPGQAPPHGYMQHQIGHMPPNQAPLGMPGGPPPPGQPQGPPPPGMVMPRGGPPPHNHP
QGMPPMPPHHNMMGGYHPASSPGASTPPASAAAAPPGQQQPPPSQTPPHGSIPPTAAANG
APSSSPMQGSLASGPDNLNALQRTIDSMEEKGMQDDPRYSQLLAIRARNSPHFSNAQLNQ
LKAQIAAYRNLARNQPITQQIALMATGKRSGDSPPECPTPPAQPPSPYGGNSGSGPAGTA
GAGYAGAADPARGGGGAPPTPLPMTGQMAPPTQPTPPLVNPPVGGAPPVRGAAPVRPPAP
GAPGSQPAQAGAPTPGAKQNRITSIPKPAGIDPLMVLNERENRIASRISHRMEMLSNLPA
NIPDDLRLQAQIELRALRLLNFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREA
RATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEYHRNNVAKLSRINKGIMNYHAN
AEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIASLTEMVKQ
HKQEQRKKQQEEERRKRKSRKKKVLEGGEIDALDDSSQTSDSRVAVMDPKSGETLRGEEA
PLLSQLKDWMESHPGWEVMSDSDDSGDDSQDDEHGRRRGHRDERTDKEKSDEDKAREMIK
KAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGNLKEYQIKGLEWLVSLFNNNLNG
ILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPTVLVVSYK
GSPQSRRLVQTQMRSTKFNVLLTTYEYVIKDKGVLAKVQWKYMIIDEGHRMKNHHCKLTQ
VLNTHYVAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVE
LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIVKCDMSGLQRVLYKHMQSKG
VLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFPHIEEKFCDHVGGGGGIVSGPDL
YRVSGKFELLDRILPKLKASGHRVLVFCQMTQCMTIIEDYLSWRGFLYLRLDGMTKAEDR
GELLKKFNDVDSEYFMFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQ
RNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDG
DDEEEENELPDDDLINEMIARSEDELEMFRQIDIERKKVENQSRLIEESELPDWLVKNDD
EVVCNKGQGWNYLDEDETLGRGSRQRKEVDYSDSLTEKEWLKAIDEEFEDDEEEDDDDEV
LDKKKKKGRKRRRNQDESDEEEAPSSTKKKSKTEINQLKKRLKNIMKKVIDHTDEAGRVL
SEPFMKLPSRRELPHYYEVIKKPLDIRKINNRIEDGKYNDISDLERDFFTLCANAQTYNE
EVSLIYADSVRLRNVFIEIRRRYENAQNSDDSDDNEKDEEDSDGDSNRSVKMKIKIGKGK
GKNTPRKRKQRKYISDDDDYEMD
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggctagtccttcgccccagaacagtccaatgcctccacctcaggccccgagtcctatg
gggccaccgacgcaaagcccggctccgccgcattcacctcatagtccatacagtcaacat
gtgaatggtccacctccgtctcatccgtctggatcaagccaaccacctatttctaatcat
atgccagcatcaggtcctccccataatatcgcgcctaatggtaacggtccgcctggagtt
tcacaacatccgaacataccgccgaacagtcatcaaatgccttcccatatggttggccct
catatgtcaggaccacctggtcaccctattagtgctactggggctggccctaacggacat
ccaaatatgcctggccaagctccaccacatggatatatgcaacatcaaataggtcatatg
ccaccaaatcaggctccactgggtatgccgggaggtccaccacccccaggtcaaccacag
ggacctcctccgcctggcatggtcatgcctcggggaggcccaccaccacacaatcatcct
caaggcatgccaccaatgcctccacatcacaacatgatgggaggatatcacccagcatca
tctccaggggcttcaacaccacccgcatctgcagccgcagcgcctccgggccaacagcag
ccacctccatctcaaactcctccacatggttcaattccaccgacggcagcagcaaatggt
gcaccttcttcgtcgccaatgcaaggatctcttgcatctggaccagataatttgaatgcg
ctgcagcggacaattgattcgatggaagagaaaggcatgcaagatgatcccagatattca
cagttgttagcaattcgagcaagaaacagtccacacttttcaaacgctcaattgaatcag
ttaaaagcccaaatcgcagcctaccgtaatttagcccgcaatcagccaataacgcaacag
atagcgttaatggccactgggaaacgtagtggtgattcgccccccgaatgtcctactcct
cctgcccagccaccatcaccttacggtggtaactcgggctctggcccagcggggactgct
ggcgctgggtatgcgggagctgcggatccagcacgcggtggcggcggtgctccgccaacg
cctcttcctatgacaggtcaaatggccccacccacgcaaccgacgccgccactagttaat
ccccctgtcggtggtgccccacccgtgaggggtgcagctcccgttcgcccacctgcccct
ggtgctccaggttcacagccagcgcaagcgggggcacccacccctggggcgaaacaaaac
cggattacaagcattcctaaaccggcgggtatagacccactcatggtgctgaatgaaaga
gagaatagaatcgcatcgcgtatatctcaccgtatggaaatgttatcaaacctcccggcg
aatattcccgacgacttgagactgcaagcgcagattgagctcagagcactacgacttctt
aatttccaaaaacaattacgatccgagatattaggccaagttcgtcgcgatactactcta
gagactgctgtaaatataaaagcgtacaaacgaacaaaacgccaaggtcttcgagaagct
cgggctacggagaaattggaaaaacagcagaaactcgaagcggaaaggaaacgtcggcaa
aagcaccaggagttcttgcaaactgtgctacaacatgccaaagacttcaaggagtatcac
cgaaacaacgtcgcgaaactttcacgtatcaacaagggtataatgaattatcacgcgaac
gctgagcgagaacaaaagaaggaacaagaacggattgagaaagaacgtatgcgacgtctt
atggcagaagatgaagaaggctataggaagcttattgaccagaagaaagataagagattg
gcgttccttctatctcaaactgatgagtacattgctagcctcactgagatggtgaaacag
cataagcaagagcaaagaaagaaacaacaagaagaagaacgaaggaaacggaaatcgcga
aagaagaaggttctagagggtggtgagatcgacgcgcttgatgatagctcgcagacatct
gattcgcgggttgccgtcatggatcctaagtcgggagagactttgaggggcgaagaagct
ccattactatcgcagctgaaggattggatggaatctcatccaggatgggaagtgatgtct
gattcagacgattctggagatgacagtcaggatgatgaacatggcaggaggagagggcac
agggacgagaggactgataaagagaagagtgatgaggataaagcccgagagatgatcaag
aaggccaaggtggaggatgacgaatacaagacagaagaacagacatattacagcatcgcc
cacactgtgcacgagtctgtaacggagcaagccagcatattggtgaatggaaatcttaag
gagtatcaaattaagggtctcgaatggctggtgtcactgttcaataacaacttgaatggt
attttggccgatgagatgggtctcgggaaaactattcaaactatagcattggtcacatac
cttatggagaagaagaaagtaaatgggccattcctcattattgtgcccctcagtacatta
tccaactgggtgctagaatttgaaaaatgggcgccgactgtactagtggtgtcatacaag
ggatcgccgcaatcccgccgtctcgtacagacacagatgcgttcgaccaagtttaacgta
ctgctcacaacgtacgaatatgttattaaggacaagggtgtactcgcgaaggtacaatgg
aagtacatgatcattgacgaaggtcatcgtatgaagaaccaccactgcaaattgacccaa
gtgcttaacacacactacgtggcgcctcatcggttgttgctaacaggaacgccgttgcaa
aataagttgccggaactgtgggcgctcttgaacttcctcttgccctcaatctttaagagt
tgctcgacttttgagcaatggttcaacgccccgttcgctactactggcgaaaaggttgaa
ctgaacgaagaagaaaccattcttattatccgtcgtttgcataaagtgttacgtccattc
ttattacggcgtctcaaaaaggaagtggagagccagttgcctgataaggtggaatatatc
gttaaatgtgatatgagtggtctgcaacgtgtattgtacaagcacatgcagtcgaaaggt
gttcttttaaccgacggttctgaaaagggtaataagggcaagggcggtgccaaggcatta
atgaacacaatcgtacaactacgtaaactgtgtaaccatcccttcatgttcccgcatatc
gaggaaaagttttgtgaccacgtaggaggtggtggtgggattgtttctggaccagatcta
taccgtgtctctggtaagttcgagctgttagaccgtatcttgccgaagttgaaagcgtcg
ggacacagagtacttgtcttttgtcagatgacacaatgtatgacaattattgaggactac
ttgtcatggagaggatttctatatttaagacttgacggtatgacaaaagccgaggatcga
ggagaattattaaagaagttcaacgatgtggattctgagtattttatgtttttactatct
acacgtgctggtggtttgggactcaacttgcaaagtgctgacactgtcattatattcgat
tctgactggaatccgcatcaggatttacaagctcaagatcgtgcgcatcgtatcggtcaa
cgtaacgaggtgagagtgttgcggctgatgactgtcaactctgtagaggagagaatcttg
gcagctgctagatacaaattgaatatggacgagaaagtaattcaagccggtatgttcgac
caaaagtcaactggttctgaacgtcagcaattcttgcagagtattcttcatcaggatggt
gacgatgaggaggaagagaatgaactaccagacgatgacttgataaacgaaatgattgct
cgctctgaagatgagttggagatgtttagacaaattgacatagaacggaagaaagttgaa
aatcagtcgcggctcatcgaagagtccgaactaccggactggctggtcaagaatgatgat
gaagtcgtttgtaataagggccagggttggaattatttggatgaagatgaaactctcggc
cgaggctctcgtcaacgcaaagaagtggattattcagattctcttactgaaaaggagtgg
ctgaaagcaattgatgaagaattcgaagacgatgaagaagaagatgatgacgatgaagtt
cttgataagaagaaaaagaagggacgaaaaaggcgtcgcaaccaagacgaatctgatgaa
gaagaggctcccagttcaacaaagaaaaagagtaaaactgaaattaatcaactcaaaaag
agattgaaaaatattatgaagaaagtcattgatcacacagacgaagctgggcgggtttta
tcagagccgttcatgaaactaccctctcgtagagagctgccgcactactatgaagtcatt
aagaaaccacttgacatcaggaaaatcaacaataggatagaggatggaaagtacaatgac
atatctgatctagaacgagatttcttcactctgtgcgcaaacgctcagacatacaacgaa
gaagtatctctcatttacgcggactctgtgcgcttgagaaacgtctttatagaaataaga
aggagatatgaaaatgctcagaattcggatgattcagatgataatgaaaaagatgaggaa
gactcggatggggactcaaaccgttcggtgaagatgaagattaaaatcggtaaaggaaaa
ggcaagaacactcctcgaaaacgtaaacaacgtaaatatatatctgacgacgacgattat
gagatggattaa
DBGET
integrated database retrieval system
