Pieris brassicae (large cabbage white): 123706966
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Entry
123706966 CDS
T08632
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03013
Nucleocytoplasmic transport
pbx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123706966
03015 mRNA surveillance pathway
123706966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123706966
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123706966
mRNA cycle factors
P-body specific factors
123706966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
HA
DUF1127
Motif
Other DBs
NCBI-GeneID:
123706966
NCBI-ProteinID:
XP_045512609
LinkDB
All DBs
Position
3:3282962..3293254
Genome browser
AA seq
1106 aa
AA seq
DB search
MTTSEKDAEGKTDSTGGEPPENTEDNDRMVLSEYITQLEARISSKSDIRNKNLNCVRPPE
NHFSKLDSGLKKNTTFVKKLKSFSAPQLDILMKDLSTLNLTKYISEVAAALVEAKLKMSD
IAPAINLCSALHRTYTEFSPFFFENWQKILSFKATDKIANSSKLRVDLRFYAELVCVGIF
TNKTGLPLLGNVLTVLINMDKEDHNNIPILLSFCKHCGEDYAGLIPKKIKDVAEKLNVTV
PRNTFLPAEKQTAVRSLLKDYYASLVKHLLAERAQLQALHVANQRTLHTRGELSQERKDQ
LEQHQATYDKLLTGAQNFAEVLGEELGEAGEPPTLTLNVIETQGTVTIGGNEEYTMQAAT
DPWQDEDTRTFYTNLPDLKVFMPNYQLKETLKNKTETVTEEMLDEDLKEDELSDSEEPSV
PDVDQEEAVPSNVSNKYALDAFLNELPNCINRELIDNAAVDFVLNLNTKNNRKKLTRVLF
SVARTRLDLLPFYSRFAAILYPVLPDVCVDLCQMLKQDFKYHVRKKDQINIESKIKVVRF
IGELVKFNLYSKMEALYCLKVLLHDFKHHHIEMACNLLETCGRYLYCNSDTHQRTMIYLQ
QMMRKKTVSALDSRYVTQIENAFYYVCPPEAPAQPKEEEAPMHQFIRKILHEDLQKTNEE
KILRLMRKLNWEDTEVSAVAILHLAGGWRVRASARRALARLTAELSVWQEVVAPAVVDTI
MEEIRLTLEDPHPRYNQRRIATVRYLGELYNYKLLDSRDIFTVLYSFITFGVSNDHTNVS
ALDPPDNVFRIRLVCALLETCGAYFNSGSSKKRLDYFLVFFQNYYWFKYSDPYWTEENKF
PIYVKYIYQECLSTLRPKLTLFTSWQQGKDAIEELRQTLYPELGEEDYENEEQGEDSIAD
GLDTIVETDDETDNNPPIPEESSDDELTENAGNEEDGQDDITIEPRRPATVKDVEFESAF
EKMVMENIAERQRENRPQQRDIAVPLTCRQTTKKTYEQLLQGKEGVEFVLMVRKGTKPQY
KSFNAPPELASNLQQQALADKQEMERVKRLTLNISERQEEEEYSAESGGGSERSGNPNRG
QHMRQKYQHPKGAPDADLIFGPKKLK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgactacaagtgagaaagatgcagaagggaaaactgatagtactggaggtgagcctcca
gagaatactgaagacaatgaccgaatggtcctatcagaatatatcacccaacttgaagct
agaattagtagtaaatctgatataagaaataaaaatcttaactgtgtaagacctccagaa
aatcatttctctaaattagattctggactaaagaaaaatacaacatttgttaagaaatta
aaatcattcagtgcgcctcaattagatattttgatgaaagacttaagtacacttaaccta
actaaatatatatcagaagtagcagcagcacttgtagaggcaaaactaaaaatgtctgat
atagctcctgcaataaacttgtgttcggcacttcatcggacttacactgaattctcacca
tttttctttgaaaactggcaaaaaattctttcattcaaggctactgacaaaatagctaat
tcttcaaaattgcgtgttgacttaagattttatgctgagttggtatgtgttggaattttt
acaaataaaactggattaccactactaggaaatgttctcaccgttcttattaatatggat
aaagaagaccataataatataccaatattattatcattttgtaaacattgcggtgaagat
tatgctggtttgatcccaaagaaaatcaaggatgttgctgagaagctaaacgtcacagtt
ccaagaaatacgtttctacctgcagaaaagcaaacagcagtccgatccttgttaaaagac
tattatgcatcactagttaagcaccttttagcagaaagagcacaattacaagcacttcat
gttgcaaatcagaggactttacacactcgtggtgaactatctcaggagagaaaagatcaa
ttggaacaacatcaggctacatatgacaaattactaactggtgctcagaactttgctgaa
gtactaggcgaggaacttggtgaggctggtgagccacctactctcacattaaatgttatt
gaaacacaaggaacagttactattgggggtaatgaagagtacacaatgcaagcagccaca
gatccttggcaggatgaggatacaagaacattctatacaaacttgcccgacttgaaagtg
tttatgccaaattatcaattaaaagaaactcttaaaaacaaaactgaaacagtgactgaa
gaaatgttagatgaagacctaaaagaagacgagcttagtgacagcgaggaaccatctgtg
cctgatgtagatcaggaggaggctgtgccttctaatgtatctaataaatacgctctagat
gcatttctcaatgaactgcctaattgcattaaccgagaattaattgacaacgcagcggta
gattttgttctaaatttgaacacaaaaaacaacagaaaaaaactcaccagagtactattc
agtgttgctaggacacgactcgatttattaccattttactcaagatttgcagcaatactg
tatccagtccttccagatgtttgtgttgatttgtgtcaaatgttaaagcaagatttcaaa
taccacgtcagaaaaaaggatcagattaatattgaatcaaagataaaagttgtgagattc
attggggagcttgtgaaatttaatctatactcaaagatggaagcgttatattgtttaaaa
gtcctccttcacgatttcaaacatcatcacatagaaatggcctgcaatttgttagaaacg
tgtggaagatatttatattgtaattcagacactcatcaacggactatgatatacttacaa
cagatgatgaggaagaagacggtatcagcattagattcgcgatacgtaacacaaatcgaa
aatgcattttattacgtgtgtcctcccgaagcgcccgcgcagccgaaagaagaagaggca
cctatgcatcaattcataagaaagatccttcacgaagatctccaaaagactaacgaggaa
aagattctcaggcttatgaggaaactgaattgggaggataccgaagtttctgctgtcgca
atactacatttggctgggggatggagggtacgagccagtgcaagacgcgcgttggcaaga
ctcacagcagaattgtccgtttggcaggaagttgtcgccccagcagttgtcgacaccatt
atggaagaaatcagactaacattagaagaccctcatccaagatacaatcaacgtcgtatc
gctaccgtcagatacttgggagagctatacaactacaagctactggattcgcgtgacatc
ttcaccgtgctgtactccttcatcacgttcggagtctccaatgaccacactaacgtgtcc
gccctggatccgccagataatgtgttcagaatcagactggtctgtgctttactagaaacc
tgtggagcgtacttcaacagtggctccagcaagaaacgcctggattacttcttggtgttc
ttccaaaattactactggttcaaatattcagacccatattggacagaggaaaataagttt
ccgatatacgtgaaatatatttaccaggagtgtttgagcactttgaggccgaagttgact
ttgttcacgagttggcaacaaggcaaggatgctatagaggaattgaggcagacgttatac
cctgaattgggggaggaggattatgagaatgaagagcagggagaggacagcatagcagat
ggattggacacaattgtggagacagacgatgagactgataataatccaccgattcctgaa
gagagttcggatgacgagttgacggaaaatgcgggaaacgaagaagatggacaggatgat
attacgattgaaccgagacggccagcgactgtgaaagatgtggagttcgaatcggcgttc
gagaaaatggtaatggaaaatatagcggaaagacaacgcgaaaatcgaccccaacaacgg
gatatagcagttcctttaacgtgcagacagacaactaagaagacatacgaacagttattg
caaggcaaagaaggcgtggaatttgtgttaatggtccgtaaaggaacaaaaccgcagtat
aagtctttcaatgcgccgccagagctcgcaagtaatctccaacaacaggcactcgccgac
aaacaggagatggagagggtcaaacggttaacattaaacatatccgagaggcaagaggaa
gaagaatatagcgccgaaagcggaggaggatcagaacggagtggaaatcccaaccgaggg
cagcacatgaggcagaagtaccagcacccgaagggcgcaccggatgcagaccttatattt
gggccgaagaagttaaaatag
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integrated database retrieval system
