Pieris brassicae (large cabbage white): 123707332
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Entry
123707332 CDS
T08632
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx04382
Cornified envelope formation
pbx04512
ECM-receptor interaction
pbx04518
Integrin signaling
pbx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123707332
04518 Integrin signaling
123707332
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123707332
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123707332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbx04147
]
123707332
00536 Glycosaminoglycan binding proteins [BR:
pbx00536
]
123707332
Exosome [BR:
pbx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123707332
Glycosaminoglycan binding proteins [BR:
pbx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123707332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
123707332
NCBI-ProteinID:
XP_045513219
LinkDB
All DBs
Position
3:complement(7636069..7664145)
Genome browser
AA seq
2788 aa
AA seq
DB search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NT seq
8367 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgggaattttattttttattttggcgtcgctagcgtttacacatgccagcgaa
gatgtaccaaagaataacccaaaagatattataaatgacgaagttcgtgcagccagggac
tacaacggaaatgacaatgaagtagtggttgacatcgaagacgatgagaagaaacagtat
tacgaaactaattacgatacaagtgcgtatggatttggttatgatgtcggccctaatggt
cagtttcaccacgaaaaccgaggaccagatggtgtcacctacggttgctatggttacgta
gatccggatggctaccttcgagccacacactatgtagctgacagtcacggatacagagtt
gtagagccagaaaaagcagttgaagtttatcccgacactaaccatgtttacgatgagaat
tctgacaatgcatcggaaatacccgggcaaattattccttgggaaaaattgtacttccct
aagggatgtggaaggaccccgggtggtgttccacccaaaccccgaccgaagccaaccccg
cgacccccgaaacccccaacagatagttctgggcaaaacagcaacaccaaccctggagtt
atttaccctggaggtccaggctactatcccggtacttccggaacacccggctccccaggc
ttccccggatctccaggcagtccaggaggagcgggaggtggttattaccccggatcaggt
gctggcggtgcaggtggaccaaacggaccaaatggacctaacggagtaggtggctccaat
ggaccaagtggtcctagtggtccgggcggacctaatggtcctggaggaccaaacggtcca
aatggaccgggaggatcaggaggcggttactaccccggatcaagtggaccatcaggtccc
gccggtggaggaggttactacccaggatcacaagatggtggatattttccgggacaacca
ggctcacccggctttccaggatatccaggcagtcctggtggaccaggtggaccaggtgga
ccaggtggcccaagtggacccggtggcggttattacccaggtggtcaagtacctggagga
ggagattatcatccaggacctaacggaccgaatggaccatcaggcggtggctattaccca
ggacaaccaggaagtccaggcttaccgggttcaccaggatacccgggtgggcctggcgga
cctggaggaccaggcggcccaggaggaccaggagcgagtagccccggtcagggtggctac
cgtccaggtcaaggatcaactggtggaggctacctgccaggacagtcgggcaaaccaagc
ggacaagacggaacaggagaacccagtggcccaagtggcccaccaggcagctattatcca
ggatcttcaggaagtccgggtttacccggctcaccaggatatccaggtggtcctggtggt
cctggaggaccaggtggcccaggtggaccaggggggccaagtggagcaggcggaccaagt
gggggaggctacttaccaggacaatcaggcgatcaaaatggaccaggaggtcccaatgga
caaggaggctctggtggacctaacgggccaacagggggaggctattatccaggtcaatct
ggaggtccaggtttaccaggctcgccaggacatcccggtggtcccggaggccctggggga
ccaggtggcccaggtggaccaggggggccaagtggaccaggcggaccaagtgggggaggc
tacttgccaggacaatcaggcgatcaaaatggaccaggaggtcccaatggacaaggaggc
tctggtggacctaacgggccaacagggggaggctattatccaggtcaatccggaagtcct
ggtttaccgggttcaccaggatatccaggtggaccagggggaccaggtggaccaggtgga
ccaggtggaccaggtggaccaggcggacctgggggaccaagtagtggttataaccccgat
tcccaaggacaactaggccaacccagtcaaccaggcaccccagggcaaccaggcacccca
ggcaagccaggccaatctggacagccaggaactcccggtaaaccaggcacgccagggcaa
ccaggaggtccaggccaacaaggacaaccagggcaaccaggaaaaccaggctatccagga
acacccggacaaccaggctacccaggacaaccaggtcaaccaggcaccccaggacaacca
ggcaccccaggcaagccaggccaaccgggctatccaggacaaccgggtcaaccaggtacc
gcaggcaagccagaccaaccaggctatccaggaacacccggacaacccggctacccagga
caaccgggtcaaccaggcaccccagggcaaccaggcaccccagggcaaccaggctatcca
ggacaactaggccaaccaggctatccaggagggccaggccaacaaggacaaccagggcaa
cccggaaaaccaggctatccaggacaaccgggtcaaccaggcaccgcaggcaagcccggc
caacctggacaaccaggcacaccaggctatccaggccaaccaggccaaccaggccaacca
ggccaaccaggccaaccaggccaaccaggccaaccaggccaaccaggccaaccagtctat
ccaggacaaccgggtcaaccaggcaccccaggacaaccaggccaaccaggctatccagca
caaccaggccaaccaggctatccaggacaaccgggtcaaccaggcaccccaggacaacca
ggccaaccaggctatccaggacaaccaggccaaccaggctatccaggacaaccgggtcaa
ccaggcaccccaggacaaccaggcaccgcaggcaagccaggccaacctggacaactagga
acaccaggtcagcccggaaaaccaggagggccaggccaacaaggccaaccagggcaaccc
ggaaaaccaggctatccaggacaaccgggtcaaccaggcaccgcaggcaagcccggccaa
cctggacaaccaggcacaccaggctatccaggacaaccgggtcaaccaggcaccccagga
caaccaggccaaccaggctatccaggacaaccaggccaaccaggctatccaggacaaccg
ggtcaaccaggcaccccaggacaaccaggcaccgcaggcaagccaggccaacctggacaa
ccaggaacaccaggccagcccggaaaaccaggagggccaggccaacaaggccaaccagga
caacccggtcaaccaggctatccaggctatccaggccaccaaggccaaccaggtcaacaa
ggcccgcccggacaacccggtcaacccggctatccaggagaaccaggacaaccaggctat
ccagggcagccaggacaacaaggacaacctggcaccccaggacaacctggcaacccagga
caacctggcaccccaggacaaccaggacaacccggtaaaccaggatacccaggtcaacca
ggaggtccaggccaacaaggccaaccaatccaacccggtcaaccaggctacccaggtcaa
ccaggacaaccaggctacccaggacaaccaggacaacctggcgccccaggacaaccagaa
actccaggccagccaggacaacccggtaaaccaggatacccaggtcaaccaggaggtcca
ggccaacaaggccaaccaatccaaccaggtcaaccaggctacccaggtcaaccaggacaa
ccaggctatccaggacagccaggacaacaaggacaacctggcaccccaggacaacctggc
aacccaggacaaccaggaactccaggccagccaggacaacccggtaaaccaggataccca
ggtcaaccaggaggtccaggccaacaaggccaaccaatccaacccggtcaaccaggctac
ccaggtcaaccaggacaaccaggctatccaggacagccaggacaaccaggacaacctggc
accccaggacaacctggctatccaggacagccaggacaaccaggaacaccaggccaacca
ggacaacccggtaaaccaggatacccaggtcaacaaggaggtccaggccaacaaggccaa
ccaatccaacccggtcaaccaggctacccaggtcaaccaggacaaccaggctatccagga
cagccaggacaaccaggacaacctggcaccccaggacaacccggtaaaccaggataccca
ggtcaaccaggacaaccaggctatccaggacagccaggacaaccaggacaacctggctat
ccaggacagccaggacaaccaggaacaccaggccagccaggacaacccgataaaccagga
tacccaggtcaaccaggaggtccaggccaacaaggccaaccaatccaacccggtcaacca
ggacaaccaggctatccaggacagccaggacagccaggacaaccaggacaacctggcacc
ccaggccagccaggacaacccggtaaaccaggatacccaggtcaaccaggaggtccaggc
caacaaggccaaccaatccaacccggtcaaccaggctacccaggtcaaccaggacaacca
ggctatccaggacagccaggacaacaaggacaacctggcaccccaggacaacctggcaac
ccaggacaaccaggaacaccaggctatccaggacagccaggacaaccaggaacaccaggc
cagccaggacaacccggtaaaccaggatacccaggtcaaccaggaggtccaggccaacaa
ggccaaccaatccaacccggtcaaccaggacatccaggctatccaggacagccaggacag
ccaggacaaccaggacaacctggcaccccaggccagccaggacaacccggtaaaccagga
tacccaggtcaaccaggaggtccaggccaacaaggccaaccaatccaacccggtcaacca
ggctacccaggtcaaccaggacaaccaggctacccaggacagccaggacaaccaggacaa
cctggcaccccaggacaacccggtaaaccaggatacccaggtcaaccaggacaaccaggc
tatccaggacagccaggacaaccaggacaacctggcaccccaggacaaccaggacaacct
ggctatccaggacagccaggacaaccaggaacaccaggccagccaggacaacccggtaaa
ccaggatacccaggtcaaccaggaggtccaggccaacaaggccaaccaatccaacccggc
caaccaggctaccccggtcaaccaggacaaccaggctatccaggacagccaggacagcca
ggacaaccaggacaacctggcaccccaggacaacccggtaaaccaggatacccaggtcaa
ccaggacaaccaggctatccaggacagccaggacaaccaggacaacctggcaccccagga
caaccaggacaacctggctatccaggacagccaggacaaccaggaacaccaggccagcca
ggacaacccggtaaaccaggatacccaggtcaaccaggacaacccggtaaaccaggatac
ccaggtcaaccaggacaaccaggaacaccaggccagccaggacaacccggtaaaccagga
tacccaggtcaaccaggacaacccggtaaaccaggatacccaggtcaaccaggaggtcca
ggccaacaaggccaaccaatccaacccggtcaaccaggctaccccggtcaaccaggacaa
ccaggctatccaggacagccaggacagccaggacaaccaggacaacctggcaccccaggc
cagccaggacaacccggtaaaccaggatacccaggtcaaccaggaggtccaggccaacaa
ggccaaccaatccaacccggtcaaccaggctacccaggtcaaccaggacaaccaggctat
ccaggacagccaggacaacaaggacaacctggcaccccaggacaacctggcaacccagga
caaccaggaacaccaggccagccaggacaacccggtaaaccaggatacccaggtcaacaa
ggaggtccaggccaacaaggccaaccaatccaacccggtcaaccaggctacccaggtcaa
ccaggacaacccggtaaaccaggatacccaggtcaacaaggaggtccaggccaacaaggc
caaccaatccaacccggtcaaccaggctacccaggtcaaccaggacaaccaggctatcca
ggacagccaggacaaccaggacaacctggcaccccaggacaaccaggacaacctggctat
ccaggacagccaggacaaccaggaacaccaggccagccaggacaacccggtaaaccagga
tacccaggtcaaccaggaggtccaggccaacaaggccaaccaatccaacccggtcaacca
ggctacccaggtcaaccaggacaaccaggctacccaggacaaccaggacaacctggcgcc
ccaggacaaccaggaactccaggccaaccaggacaacccggtaaaccaggatacccaggt
caaccaggaggtccaggacaacaaggccaaccaatccaacccggtcaaccaggctaccca
ggacaaccaggacaacctggcgctccaggacaaccaggaactccaggccagccaggacaa
cccggtaaaccaggatacccaggtcaaccaggaggtccaggacaacaaggccaaccaatc
caacccggtcaaccaggctacccaggacaaccaggacaacctggcgctccaggacaacca
ggaactccaggccagccaggacaacccggtaaaccaggatacccaggtcaaccaggaggt
ccaggccaacaaggccaaccaatccaatccggtcaaccaggctacccaggtcaaccagga
caaccaggctaccctggacaaccaggacaacctggcaccccaggacaaccaggaacacca
ggccagccaggacaacccggtaaaccaggatacccaggtcaaccaggaggtccaggccaa
caaggccaaccaatccaacccggtcaaccaggacaaccaggctatccaggacagccagga
cagccaggacaatcaggacaacctggcaccccaggccagccaggacaacccggtaaacca
ggatacccaggtcaaccaggaggtccaggccaacaaggccaaccaatccaacccggtcaa
ccaggctacccaggtcaaccaggacaaccaggctacccaggacagccaggacaaccagga
caacctggcaccccaggacaacccggtaaaccaggatacccaggtcaaccaggacaacca
ggctatccaggacagccaggacaaccaggacaacctggcaccccaggacaaccaggacaa
cctggctatccaggacagccaggacaaccaggaacaccaggccagccaggacaacccggt
aaaccaggatacccaggtcaaccaggaggtccaggccaacaaggccaaccaatccaaccc
ggtcaaccaggctaccccggtcaaccaggacaaccagggcagccaggtcaacccggtaaa
ccaggatatccaggtcaactcggaggtccaggccaacaaggccagccaggtcaatcagga
acgccaggacaatcaggacaaccaggctatccaggacagcctggtaccccaggacaacca
ggaacgccaggccagccaggccaaccaggctatccaggtcaaccaggaacaccaggacaa
ctaggaacaccaggacaaccaggaacaccaggccagccaggacaaccaggacaacaagga
caaccaggaagcccaagtgggccaggacagcccggccagcaacagccaggaaagccaggc
ggtggtgattcggttggtgaatcaactggcactggtgtgcaaccaccccaagtttatccg
ccggggctaatgcctccgttcccaatgtacgtcataccatatcctttgcccatagtgcca
tatccaggttcatgtccgtgctacctcttgaacccgggaaataacagcagcagtacagct
gtcacccaggcgccaacacaaagccctccgccatactattcaccgtatggaataattggt
tttctaccagtggtctttgttccaagctgccccggtaacgtaactgatatgcaaactgca
caacagaacttccccggagctgtaccagttccatacaattgcgctcagtgccaggcaaac
cgagacatatatagatatttcgggagaattggtggcgctcgaaacgtggatttcaacgat
cttaaagaaataacttccctgccagagttggaaagtttattgaagaatgaaataaaggtg
cccagaaaaagtctacgaagaattaaagtacacgcccgcgttttagacgataagaaagac
gaaaagaaaactgtatcgaaagagtaa
DBGET
integrated database retrieval system
