KEGG   Pieris brassicae (large cabbage white): 123707468
Entry
123707468         CDS       T08632                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pbx  Pieris brassicae (large cabbage white)
Pathway
pbx03030  DNA replication
pbx03410  Base excision repair
pbx03420  Nucleotide excision repair
pbx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pbx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123707468
   03410 Base excision repair
    123707468
   03420 Nucleotide excision repair
    123707468
   03430 Mismatch repair
    123707468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbx03032]
    123707468
   03400 DNA repair and recombination proteins [BR:pbx03400]
    123707468
Enzymes [BR:pbx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     123707468
    6.5.1.6  DNA ligase (ATP or NAD+)
     123707468
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     123707468
DNA replication proteins [BR:pbx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123707468
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     123707468
DNA repair and recombination proteins [BR:pbx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     123707468
   NER (nucleotide excision repair)
    Other NER factors
     123707468
   MMR (mismatch excision repair)
    Other MMR factors
     123707468
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 123707468
NCBI-ProteinID: XP_045513485
EnsemblRapid: ENSPBSG00000017307
LinkDB
Position
3:20791202..20805749
AA seq 896 aa
MHRYNIFKISRVITSLVNCSLYCNNSSHRLHVCFRSTFFLRNMSQSSIRSFFTVTPKKPV
EVKTEEQKNKSFDSDKDSPPSNGQYKITKRSRSTSTEEEIKSNSATPELSEKKKPKRRRI
VSSESESDSKSDHEIKLDKTRQPKTYDSPKTKKINKIKTEKLSPVSKKSKEKSECPTAKK
DSPKVKKETVTSPRNKKEEIKSPPDKKKIASLFAKKTDLKVEDKENSKVEKDKTAEVDYN
PAKPKYHPINDACWNKGQEVPYLALAKTLENIEGTSARLKMIDILSNYLRSVIILTPEDL
LPSIYLCLNQLAPAYYSLELGMAETYIMKAIGQCTGRTLAQVKSAARTTGDLGLVAEQAR
ATQRTMFPPPPLTLRKVFAALKEVAQATGQASVNKKIGKIQSLYVACRHSEARYLIRSLE
GKLRIGLAEQSVLQALACACAASPTAGPLAGTVDVSADMSQEKFKARVDEFALIIKTTYC
ECPNYDSIVDILLKYGVEALPQHCKLTPGVPLKPMLAHPSRGVADLFTRFDGERFTCEWK
YDGERAQIHVPGTDSPDLTKASIFSRNQENNTSKYPDVLSRLPKLLKGSVQSCVLDCEAV
AYDTVKKQILPFQILSTRKRKDAQASEIKVQVCVFVFDLLYLNGSPLVREPLEKRRALLR
ENLNEIEGEWEFARGRDCSSPEEVEGELAEALRGSCEGLMVKALDGDKARYDIARRSHNW
LKLKKDYLEGCGDSIDAVVVGGYHGKGKRAGHYGGFLLACYDPEMDAYQTLCKIGTGFSD
EDLRTFSETLQTHVIDAPKSYYSYENSMNPDVWFEAACVWEVRCADLSLSPAHRAALGLV
DRDKGISLRFPRFIRCRDDKRPEQATSARQVADMYLAQDQVKNTAGNKTAQEDDFY
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgcatcggtataacattttcaagatcagtagagtaataactagtcttgtaaattgctcg
ctctattgtaataattcctctcacaggttacatgtttgttttagaagtacatttttccta
cgaaatatgtcgcaatctagcattcggtctttctttactgtaactcccaaaaagccagta
gaagtcaaaacggaagaacaaaaaaataagtcttttgatagtgataaagactctccacca
agtaatggacaatataagataacaaagagatcaagatctacaagtactgaagaggagatt
aagagtaattctgcaacaccagagttatctgaaaagaaaaaaccaaagcgcagacgcatt
gttagttctgaaagtgagtcagattccaagtcagaccatgaaataaaattggataaaacc
aggcagcctaaaacttatgactctcccaagacaaagaaaattaataaaatcaaaactgaa
aaattaagtccagtaagtaaaaagtctaaagaaaaatcagagtgtcctactgctaaaaag
gacagccctaaagtcaagaaagagactgttacttcaccaagaaataaaaaagaagaaata
aaatcacctccagataaaaaaaagatagcttcactcttcgcgaagaagactgaccttaaa
gtagaagataaagaaaatagtaaagttgaaaaagataaaactgcagaggtggattacaac
ccagcgaagccaaaataccatccaattaacgatgcatgttggaacaaaggtcaagaggtc
ccctacttagcattagccaagacgttggagaacattgaaggcacatcggctagactgaaa
atgatagatattctgagcaattacttacggtctgtgattattctcacacctgaggatctg
ctgcccagcatctatttgtgcctgaatcagttggcaccggcatattacagtttggaactt
ggtatggctgagacgtatataatgaaagcaataggccagtgtactggtcggacgctggcc
caagtgaaaagtgcagcgcgcactaccggagacctgggacttgtggcggaacaggcgaga
gcgacacaacgcactatgttccctccaccgcccctaacgttgaggaaggtctttgctgcc
ttaaaagaggtcgctcaagccaccggtcaggcgtcagtaaacaaaaagataggcaaaata
caatcgctgtacgtcgcttgccgacactccgaagcacgctatctgatcagatctctggaa
ggtaagttacgtataggtctagctgagcaatcagtgcttcaggcactcgcatgcgcatgc
gctgcgtcccctacagctggtcctctcgctggcactgtagacgtcagtgcggatatgagt
caggagaaatttaaggcacgcgtagatgaattcgcactaataataaaaacgacatactgc
gagtgcccaaactacgattcaatagtagatatattactcaagtatggggtggaggctttg
ccccaacactgcaagttgaccccaggagtcccactcaaacctatgctggcgcacccttcg
agaggagtagccgatctttttactaggttcgatggtgagcgattcacatgtgaatggaag
tatgatggcgaacgagcgcaaattcacgtccctggtacagactcacctgatctcacaaag
gcgtccatctttagtaggaatcaggagaacaatacaagtaaatacccggatgtcctgagc
cgtttgcccaaactgctgaagggttcagtgcaaagctgtgtattggactgtgaggctgtt
gcatatgacaccgtaaagaaacagattctacccttccagatcctgtcaacacgaaaacgc
aaagatgcgcaggcgtcagaaatcaaagtacaagtgtgcgtgttcgtctttgacttgctt
tatttgaacggatcgcctcttgttcgggaacctttggaaaaacgtcgagctctattgagg
gaaaacttaaacgaaattgaaggtgaatgggaattcgctcgtggtagagattgtagtagc
cctgaggaagtggaaggtgagctggcggaagccttgcgaggaagctgcgagggtctcatg
gtgaaggcgttggatggggacaaggcgagatatgatatcgctcgtcggtcgcataattgg
cttaagcttaaaaaagactacctagagggttgtggagacagcatagatgcagtggtggta
ggcggataccacggaaagggcaaacgagcaggacattacggtggatttctgctcgcctgc
tacgaccccgaaatggatgcttatcagaccctctgcaagatcgggacaggattttctgat
gaagaccttcggacatttagtgagacattgcagacgcatgttattgatgcccccaaaagt
tattatagttatgaaaacagtatgaacccggatgtatggtttgaggcggcgtgtgtatgg
gaagtgcgttgtgctgacttgtctttgtcgcctgcgcacagagcagctctcggcttagtg
gaccgggataaggggatctcactgaggtttcccaggttcatccgctgtcgtgacgataaa
cggcccgagcaagcgacgagcgcgcggcaggttgctgatatgtacttggcccaggatcaa
gtgaaaaacacagctggaaataagactgctcaagaagacgatttttactag

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