Pieris brassicae (large cabbage white): 123707984
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Entry
123707984 CDS
T08632
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03018
RNA degradation
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123707984
09123 Folding, sorting and degradation
03018 RNA degradation
123707984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123707984
03041 Spliceosome [BR:
pbx03041
]
123707984
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123707984
mRNA degradation factors
5'-3' decay
Lsm complex
123707984
Spliceosome [BR:
pbx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123707984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
LSM14
Motif
Other DBs
NCBI-GeneID:
123707984
NCBI-ProteinID:
XP_045514332
LinkDB
All DBs
Position
4:4850992..4851448
Genome browser
AA seq
95 aa
AA seq
DB search
MSQPLPNPNTLLPLELVDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYESTP
EGRKITKLDQILLNGNNIAMLVPGGEMPGDSYEGQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaccgctaccgaatccgaatacattattgcctcttgaacttgtggataaatgt
ataggatcaagaattcatattattatgaagaatgataaagaaatggttggaactcttcaa
ggttttgatgactttgttaacatgttattagatgacgtgacggaatatgaatctacacct
gaaggcagaaaaataaccaaactggaccaaatacttctaaatggaaataatatagctatg
ttggttcctggaggagaaatgcctggtgactcatatgaagggcaatga
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