Pieris brassicae (large cabbage white): 123708135
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Entry
123708135 CDS
T08632
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123708135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123708135
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123708135
mRNA degradation factors
5'-3' decay
Decapping complex
123708135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
DUF7774
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
123708135
NCBI-ProteinID:
XP_045514625
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All DBs
Position
4:complement(16548357..16565704)
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AA seq
1114 aa
AA seq
DB search
MQPTTMHPKLSDTTQNIKKNIYSAFAEEDDMCNAVVFATDVVVTTNIGNHNHGSSKVKLT
NIVDYNWEAKFYPGRLIDVHNSGKYLAYCIKPPVSVDGMVRVVYMEPDVNERCLIKGMKG
EVQDLAFAFIQNQVLLACIDEYGNIYVHEFIYGDGRLRSTLIAEIQEDTGLGGSAHLVAW
CPYIPDEDDDSSDDDVAKMLLSTHSNVARIWNIREVSAITGGVVKGREALNRGLGQIAST
HAAALRAAAFSPDGTALATAGADGYVMFAQVCIDGSDVPRCLHKWQPHEGKPLTCLFFLD
NRKNYNTDVQFWKFAITGADNNTNIKIWTCKTWMCLQTITFTPPLGTDLPLSLKAQLDAS
ASYLLLSDFKTRSLYVLNMKRDDEDRMAYCKSVSEFLLPYQVLGFCIVDAEEQLVKCESR
CDDPFHRNGSALDNSPADFDLHDNEVCTENEAGSKRTKVRLYLMQPKGLQEANLIYTQQP
TEKQSDDLESLTLEEPVEEDEIPSNILQQQTQQLKNLLLRSQNQTNILINPRVESPTDMP
QLNLMTPDAFSSPGKRDEEETSVTVQDIPRLSNAGCEEDEVVSFSSAKQVSGGSSPSREV
QQIMSHNDFYKDDEEESQSPAVEELTTNGTDTIYPTELYVSPEKPQAAAKLTHSNSETSW
PQISLAQITEANQRKASSDKSSSQSLSAPLSAPLTAPPQPTVVTVVDETTKNKLESLESK
LDKLTDLVTQQARELRALRNESRPAREFVEQALLEHTQRTTAAIDTALSSGWERISRMGE
SASVTAAQAAGAGAARALEPLAAALQHELAVKLTATDKLLSENINKLVNSKTVMERLSGS
IASSLSEMVRTSFRDALLESAVPMMEKAHAQIFRQINHAFQNGTKEFTANTEQAARLAAE
RGGAAAANALRSALEQHTEALARATPVQPQLFAAQLKEVAHNVLEKEMSWWREQARNVAV
QMSRAQTPATPSVSERQLQVSQIQQLLLNGDANGAFQMALQAADLNLVVGTCKSTDPSNI
FGPPCKLKQPVLLSLVQQLAADMGRDTQIKLRYIEEALMNLDTNSPATIENLPKVIPGLQ
KNIANFLNANPIHALTRQFKVLLMAAESLNKFCA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgacaaccatgcatcccaaactctccgatactacccaaaatattaaaaaaaat
atttacagtgcatttgcagaagaagatgatatgtgcaatgctgtagtctttgcaactgat
gtggtagttactactaacattggtaaccataatcatggtagctctaaggtaaaactcaca
aatattgtggattataactgggaagcaaaattttatccaggccgcctaattgatgtgcat
aacagtggaaaatatttagcttattgcattaaacctccagtatctgtggatggaatggtc
agagttgtatacatggaacctgatgtaaatgaaagatgtcttatcaagggtatgaaagga
gaggtccaagatttggcttttgcattcattcagaatcaagttctcctcgcttgtattgat
gaatatgggaatatttatgtccatgagtttatctatggagatgggagactcagatcaaca
ctaattgcggagattcaagaggacactggcctggggggttctgctcacttagtagcttgg
tgcccttacatccctgatgaagatgacgactccagtgatgatgatgtagccaagatgcta
ctcagcacacattctaatgttgctcgaatttggaatatacgcgaagtgagtgcaataact
ggtggcgttgtcaaaggtagagaagcgttaaatcgaggcttgggacagatagcaagtaca
cacgcagcagctctacgtgctgctgctttctcccctgatggtacagcattagcaactgca
ggggcagatggatatgttatgtttgcacaggtatgcatagatggatcagatgtaccccgt
tgtcttcataaatggcagccacatgaaggcaaacctctcacctgtctcttctttctggac
aaccgtaaaaattataatactgatgtccaattctggaaattcgcgataacaggcgcggat
aataacacgaacataaagatatggacctgcaagacctggatgtgccttcagacgattaca
ttcactcctcccttgggcacagatctgccgttgagtttgaaggcccaattagatgccagt
gcgagctatttgcttctaagtgactttaaaactagaagtctttatgtgcttaatatgaag
agggacgatgaagaccgaatggcatattgcaagagtgtctctgagtttttgctaccgtat
caggtgctcgggttctgtattgtagatgctgaggagcaattggtgaagtgtgagtcgcgt
tgtgacgatccctttcacagaaatggatccgcacttgacaattcccctgctgattttgat
ttacatgacaacgaggtgtgcacagaaaatgaagcaggttcaaagcggactaaagtacga
ctttatttgatgcagcccaaaggtttacaggaggcaaatcttatatacacacaacaaccc
actgaaaaacaatcagatgatttggaaagtttaacgcttgaagagccagtggaagaagac
gaaattccttcaaatatcctacagcaacaaacacaacaactcaagaacctacttcttagg
tcacagaatcaaacaaacattcttataaatcctcgagtcgagtcacctactgatatgccg
cagctgaatcttatgacgccggacgcttttagctctcctggtaaacgtgatgaagaagag
acttcagtgaccgttcaagacattccgcgactatcaaatgccggttgcgaagaagatgaa
gtggtcagcttcagttcggccaagcaggtctccggtgggtcctcaccaagtcgagaggtt
caacaaattatgtctcataacgacttttataaggatgatgaagaagaatctcagtcccca
gcagtagaagagttgaccacaaacggaacagacacaatttatccaactgagttgtatgtt
tcacctgagaaaccgcaagcagccgccaaattaacccatagcaacagcgaaacgtcctgg
ccgcaaatttcgttagctcaaatcacggaagcaaaccagcgtaaagcgtctagcgataaa
tcaagcagtcaatcgctttccgctccgctatcagcaccgctaaccgctccaccgcaacct
acagttgtaacagtcgtagatgaaaccactaagaataaactggagtctttagaatctaaa
ctcgataagctaacagatctagtaacccaacaagcgcgtgaattacgtgcattgcgcaat
gaaagtcgacctgcgcgtgagttcgtagaacaggcgttactcgaacacacgcagaggacc
acagctgccatagatacagctctttctagcggttgggagcgcatatctcgtatgggtgag
tccgctagcgtaacagcggcacaagcagcgggagctggagcggcaagagcgttggaacca
ctcgcagcggctttacaacacgagttggctgtcaaactcacagccacggacaagcttctt
tctgagaatattaataagctggttaacagtaagaccgtaatggaacgtctcagcgggtct
atagcgtcctcattatcggaaatggtgcgtacgtcgttccgcgatgcgttgctagaaagc
gctgttcccatgatggagaaagcgcacgcgcagatattccgacagattaaccacgctttt
caaaatgggactaaggaatttacagcgaacacagagcaggcagctcgtttagcagcagaa
aggggtggggcagctgccgccaatgccttgcgatcagctctcgaacaacacacggaagct
cttgctagggccacaccagtgcagcctcaattgtttgctgcgcagttaaaggaagtcgca
cataatgtactcgagaaagaaatgtcttggtggcgtgagcaagcaagaaacgtggcagtt
caaatgtcacgtgcacaaacacctgccacaccctccgtgtctgaaagacagttgcaagtt
agccaaattcagcaattgttattaaatggcgatgcaaatggggcctttcaaatggcttta
caagcagcagatctaaacttggtagtgggaacttgtaagagcacggatccgtcaaatatt
tttggaccaccgtgcaaattgaaacagcccgtcctcctttctttagtacaacagctagct
gctgatatgggaagagacacgcaaatcaaacttaggtatatagaagaagccttaatgaat
ctagacacaaacagcccggcgacaatagaaaacttaccaaaagtgataccagggctacag
aaaaacatagcaaatttcctcaatgctaatcctatccatgcattgactcgacagttcaaa
gttcttttgatggctgccgaatcactgaataagttttgtgcctga
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