Pieris brassicae (large cabbage white): 123708281
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Entry
123708281 CDS
T08632
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03030
DNA replication
pbx03410
Base excision repair
pbx03420
Nucleotide excision repair
pbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123708281
03410 Base excision repair
123708281
03420 Nucleotide excision repair
123708281
03430 Mismatch repair
123708281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbx03032
]
123708281
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123708281
DNA replication proteins [BR:
pbx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123708281
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123708281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
Rad17
AAA_22
PTCB-BRCT
AAA_30
AAA_5
AAA_14
NTPase_1
RNA_helicase
AAA_16
AAA_19
AAA_33
AAA_17
RuvB_N
AAA_7
BRCT_2
RCF1-5-like_lid
AAA_18
AAA_6
Motif
Other DBs
NCBI-GeneID:
123708281
NCBI-ProteinID:
XP_045514893
LinkDB
All DBs
Position
4:15773491..15782512
Genome browser
AA seq
1073 aa
AA seq
DB search
MSKSIRSYFTVIKKQTTKIAHDDSDIIPESPEIRVKKKKQTKKRRIEDSDEEIFSPKVKK
VDIGQKSAQKSPKLKEVTITDLFGSEKIKKTESLVVKNKSEKQTEIGIHSDEEFEQSLLE
LDTIDNISPEQVKSYKKDQGKCIVEEEPKSNKEVPKVKISPPQLSSTKDDTSKSSKKPKK
HHQTESELKEKHYKITNNDNDKKNSKNQNNNDKIIEIEDDEKGHKFNNCSVEEKPHAINK
SKMRKRDLSEFLEDDDHDTSFKKKKHDDSLNESALSDQERHERKRLSASLYQKYLNRTGP
KNLGAKEIPEGAPGCLKDCAFLLTGVLDSFEREEILEAITKYGGSVKSGVSKKVTHVLAG
EDAGPAKTAKAETLGIKIINEDQFLNMITELSKKNKNKKSNTNDKPHVKIENSDKNKSPN
DEKSKKNEKTTKDKSKLSLNDKVKKEGSVSPKATITLKNNKSVSLKNPIKKERSVSPKAK
IKKEILDSPKKDFYGKINKKKSEEEVEQIDNVDNSSKDASLMWVDKYKPQSIKQIIGQHG
EASNVKKLINWLTKWYVNRKAKLPKPNPWAKNDDGGYYKAALLSGPPGVGKTTTVGLVCK
ELGFDTVEFNASDTRSKNLIKEQISELISTKSLSGYAKGVTGKQAVTKKHVLVMDEVDGM
AGNEDRGGLQELISLIKSSSVPVICMCNDRNSEKMRSLVNYCYDLRFSRPRVDQIKAAML
TICFKEGVKVPGDVLSQLISAAGQDIRQTLHLLSVWTADPTLTERDKLQKEVQRVKKDIK
MGPWDAIRKVFSAEEHKTMSIIDRSDLFFTDYSLAPLFVHENYPQVVPHCPKHEVLDRMS
KAVDSLSLGDLVDSRIRSNQAWSLLPLQAMYSSVIPGQQLSGHVGGQIQFPSWLGKNSRA
NKMSRLAQTIHAHTRLSTSGSKSSIFLDYSSHLRDAILNPLIKDKNEGISKSLQVLEEYH
LLRDDLESLTELSLWPGQRNPSILIDAKVKAAMTRTYNKQASALPYAPGTIKKAKHLETD
ENGLEMDAEDDLENDSDPENDLLIKKKKMKDLEKASSSKEKPQSSKGRGKKTK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagcattcgttcatattttactgtaataaaaaaacaaacaacaaaaatcgca
catgatgatagtgatataataccagaatctcctgagattcgggtaaagaagaaaaaacaa
acaaagaaaagacgtatagaagattcagatgaagaaatattttccccaaaagtaaaaaaa
gtagacataggacaaaaatcagcacaaaaaagtccaaaactcaaagaagttacaattact
gacttatttggtagtgaaaagataaaaaaaactgagtctttagttgttaaaaataaaagt
gaaaaacaaactgaaattggtatacattctgatgaagaatttgagcaaagtctattagaa
ttagatactattgacaatatatcaccagagcaagtaaaatcttataaaaaggaccaggga
aaatgtattgtagaagaggaaccaaaaagcaataaagaagtgccaaaagttaaaattagc
ccaccacaacttagttcaactaaagatgatacatcaaaatcaagtaagaaacccaagaaa
catcatcaaactgaatctgaattgaaagaaaaacattataaaataacaaacaatgacaat
gacaagaagaattcaaaaaatcaaaacaacaatgataaaataatagaaattgaagatgat
gaaaaaggccataaatttaacaattgttctgttgaagaaaaacctcatgctataaataaa
tcaaagatgagaaagagagatttgagtgaatttttagaagatgatgatcatgatacaagc
tttaaaaagaaaaaacatgatgacagccttaatgagtctgcacttagtgaccaagaaaga
catgaaagaaaaaggctatcagcgtctctatatcaaaaatacctaaatagaacagggccc
aaaaacttgggtgctaaggaaattccagaaggtgcaccaggctgtttaaaggattgtgca
tttttgctgactggagttttagattcctttgagcgtgaagaaatcttagaagctatcaca
aagtatggtggttcagtcaaatctggagttagtaagaaggtaacgcatgttctagctggt
gaagacgcgggcccagcaaaaactgctaaagcagaaacattaggcatcaaaattattaat
gaagatcaatttctcaatatgatcactgagctatcaaagaaaaacaaaaataaaaaatca
aacactaatgataaaccgcacgtaaaaatcgaaaatagtgataagaataaatcaccaaat
gatgaaaaatctaaaaaaaatgaaaagacaactaaagataaatcaaaattatcattgaat
gataaagtcaaaaaggaaggatcagtatctccaaaagcaaccataactttaaagaataac
aaatcagtgtccctgaagaaccctattaaaaaagagagatctgtctccccaaaagcaaaa
attaagaaagaaatattggactctccaaaaaaagatttttatggaaaaataaataagaag
aaaagtgaagaagaagtagagcagattgacaatgttgacaattcatcaaaagatgcatct
ctaatgtgggttgacaaatacaagccgcagagtataaagcaaattattgggcaacatggt
gaagcaagtaatgttaaaaaattaatcaactggttaaccaagtggtatgtgaatagaaaa
gctaagttgcctaaaccaaatccatgggccaagaatgatgatggtggatattataaagca
gctcttttatcaggacctcccggcgttggcaaaacaacgactgtgggcctagtgtgcaag
gaattaggctttgatacggtagagtttaacgcatcggatactcgcagtaagaatcttata
aaggaacaaatctcagaactaatatctactaaatctctgtctggttatgctaaaggggtg
actggtaaacaagcggttacaaagaaacatgttctagttatggacgaagtggacggaatg
gctggcaatgaggatagaggtggtctccaagaattaatttccctaataaagtcatcttca
gtgcccgtaatttgcatgtgtaatgacaggaacagtgaaaaaatgcggtctttagtaaat
tattgctatgaccttcgattcagccggccgcgagttgaccagattaaggcagcaatgctg
acgatatgcttcaaagaaggtgttaaagtcccaggggatgttctatctcagctgataagt
gcagcgggacaggatatccggcagaccctgcacttactgtcagtttggacggctgatccc
actctcacggagcgtgataaactccagaaggaggttcagagagtcaaaaaagatatcaaa
atgggtccatgggatgcgattcgtaaagttttttcagcagaggaacacaagaccatgagt
attatcgatcgaagcgatctgttctttacggactacagcctcgcaccactatttgtccac
gaaaactacccgcaagttgtgccccattgccctaagcatgaagtattggatcggatgagc
aaagcagtggacagtcttagtcttggtgacttagttgactctaggattagatctaatcaa
gcttggagtcttcttccactccaggccatgtatagttcagttattcctggacaacaacta
tcaggtcatgtaggtggacagatacagttcccgagctggcttgggaaaaattcacgagca
aataaaatgtcccgcctagcgcagaccatacacgctcacacaagactcagtacatcagga
tcaaaatcatcaatatttcttgactattcgtcacatcttcgcgacgccatactgaaccca
ctgattaaagacaaaaatgagggtatttcaaaatctcttcaagtgcttgaagaataccac
ctactacgggatgacctggagtcactcactgaactgtcactgtggccagggcaaaggaac
cccagcattcttatagatgccaaagtcaaagctgccatgacacggacatacaataagcaa
gcaagtgcattgccctatgcacctggtactataaagaaggcaaaacatcttgaaactgat
gaaaatggtttggaaatggatgctgaagatgatctagaaaatgatagtgatcctgaaaat
gatttacttattaagaaaaagaaaatgaaagatttagaaaaagcttccagcagcaaagag
aaaccacaatcaagtaaaggcagaggaaagaaaacaaaatga
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