Pieris brassicae (large cabbage white): 123708564
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Entry
123708564 CDS
T08632
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123708564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123708564
03036 Chromosome and associated proteins [BR:
pbx03036
]
123708564
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123708564
Coactivators
SAGA/TFTC/STAGA complex
123708564
Chromosome and associated proteins [BR:
pbx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123708564
STAGA complex
123708564
TFTC complex
123708564
SAGA complex
123708564
SLIK complex
123708564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
TFIID_NTD2
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
DSE1_N
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_HPS5
Ge1_WD40
ASA1
Beta-prop_NOL10_N
WDR54
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
123708564
NCBI-ProteinID:
XP_045515292
LinkDB
All DBs
Position
4:4195240..4200758
Genome browser
AA seq
648 aa
AA seq
DB search
MKRNRNDAVKAVVTSYLERRNYPDIDIFNTNNSISQSAEEMAVATIVQCESSRANSVLFS
CINNDPGQYDIQYTRLFNFIKELKIEQVRSELLGLLTPLLCHLYLEMLRGGHSGPAQMFL
KRHSASLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSIQNGTIDNETPEKDYMNQLLDD
IGSVYSLQEIETRPTIAAFRSCKFDICLSQDSLNMLKAYLAKHGHVLMIQVLQTWFHIDV
NGENCKSNTEDEEEEDSKDKIKIELNINENISDVFSKCNGHSEYAVDKELRDLQDAIKGV
RESLAPLKLYKIAAPDTELICAKTDQYCNVLCGGFSNSEIRLWDLGQNNINRRINRNISE
IELACSVPPDPEINDNTRQIGTGIPLRGHSGPVQAVSILSREELVLSASHDSTMRAWRIS
DYSCASVYRGHNYPIWCLDVSKNGLFIVTGSHDRTAKLWSLDRTFPVRIFVGHMSDVTCV
KFHPNEAYVATGSADRSVRLWAVCDARLVRVLCSHRGAVRALAFSPSGTHLASAGDDKKI
KVWDLAACTCVHEYRGHYGKVTSIDWSAVGKPTLTNRVSSDLSEMTTDNSILCSAGMDGI
VKVVWDSQLKNNQLSSPDNSTSTYNTKCNYLVDIQVHPDWMVAIGTKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaatagaaacgatgccgttaaagccgttgttacttcctacttagaacgtaga
aattatccagatattgatatatttaataccaacaattctataagccaaagtgcagaggaa
atggcggtagctactattgtacagtgtgaatccagtcgtgctaattctgtattgttttct
tgtattaataatgacccaggccagtatgatattcaatatacaaggctatttaattttata
aaagaacttaaaatagagcaagtaagaagtgaactactgggcttattaacaccacttctt
tgtcacttgtacttggaaatgttaagaggtggtcatagtggacctgcgcaaatgtttttg
aagcgacattcagcatcacttcctcagaaagatttatcttaccaccaaccaattgatggt
aacctaccatcagctctctataggcccaacagcttagaacagctatttaattctatacaa
aatggtactattgataatgaaacacctgagaaagattacatgaatcaactgcttgatgac
attgggtcagtttatagtcttcaggagatagaaacaaggccaactattgcagcatttagg
tcttgtaaatttgacatttgtttgtcccaagattccttgaacatgcttaaggcatattta
gcaaaacatggtcatgttttaatgatacaggtattgcagacttggtttcacatagatgtt
aatggagaaaattgtaaaagtaatactgaggatgaagaagaagaggattcaaaggataaa
atcaaaattgaactcaatataaatgaaaatataagtgatgtgttttctaaatgtaacgga
cattctgaatatgcagtcgataaagaactaagggatcttcaagatgcaataaagggagta
agggaatctctggcgccattaaaattgtataaaatagcagcccctgatactgaattaata
tgtgcaaaaactgaccaatactgtaatgttttatgcggaggatttagtaactcagaaata
agactgtgggacctcggtcagaataatattaatcgacgcattaatagaaatatatcagaa
atagagttagcatgtagcgttccaccagatccagaaataaatgataatacaaggcaaata
ggtacaggcattcccttacgaggtcattcgggccctgtacaagcagtcagcattttgtcc
agagaggaattagttctttccgcctcacatgacagtacaatgagggcatggcgaatatca
gactattcttgtgcatctgtttataggggtcataattatccaatatggtgtttggatgta
tcaaaaaatggattattcatagtaactgggtcacacgacaggacagctaagttgtggtca
cttgatagaacattccctgtgagaatatttgttggacacatgtctgacgtcacgtgcgta
aaattccaccccaacgaggcgtacgtagcaacgggaagtgcggaccgatccgtgcgtctc
tgggcagtatgcgacgcaagactagtacgcgtactttgctcgcaccgcggggccgtaaga
gcgcttgccttttcgccaagtgggacgcatctcgcctctgcaggcgatgacaagaaaata
aaagtatgggatttggccgcatgcacatgtgtacatgaatacaggggccattatggaaaa
gtgacatccattgattggtctgcagtaggaaaaccaactttaacaaaccgagtatcttca
gacctaagcgaaatgaccacagataactctatcctatgttcagctggaatggatggtatt
gtgaaagttgtttgggatagtcaattgaaaaacaatcaattatctagtccagacaattca
acatcaacttacaatactaaatgtaattatttagtagatattcaggtacatcctgattgg
atggttgctataggtactaagaaatga
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integrated database retrieval system
