Pieris brassicae (large cabbage white): 123708564
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Entry
123708564 CDS
T08632
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123708564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123708564
03036 Chromosome and associated proteins [BR:
pbx03036
]
123708564
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123708564
Coactivators
SAGA/TFTC/STAGA complex
123708564
Chromosome and associated proteins [BR:
pbx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123708564
STAGA complex
123708564
TFTC complex
123708564
SAGA complex
123708564
SLIK complex
123708564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
TFIID_NTD2
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Ge1_WD40
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
123708564
NCBI-ProteinID:
XP_045515292
LinkDB
All DBs
Position
4:4195240..4200758
Genome browser
AA seq
648 aa
AA seq
DB search
MKRNRNDAVKAVVTSYLERRNYPDIDIFNTNNSISQSAEEMAVATIVQCESSRANSVLFS
CINNDPGQYDIQYTRLFNFIKELKIEQVRSELLGLLTPLLCHLYLEMLRGGHSGPAQMFL
KRHSASLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSIQNGTIDNETPEKDYMNQLLDD
IGSVYSLQEIETRPTIAAFRSCKFDICLSQDSLNMLKAYLAKHGHVLMIQVLQTWFHIDV
NGENCKSNTEDEEEEDSKDKIKIELNINENISDVFSKCNGHSEYAVDKELRDLQDAIKGV
RESLAPLKLYKIAAPDTELICAKTDQYCNVLCGGFSNSEIRLWDLGQNNINRRINRNISE
IELACSVPPDPEINDNTRQIGTGIPLRGHSGPVQAVSILSREELVLSASHDSTMRAWRIS
DYSCASVYRGHNYPIWCLDVSKNGLFIVTGSHDRTAKLWSLDRTFPVRIFVGHMSDVTCV
KFHPNEAYVATGSADRSVRLWAVCDARLVRVLCSHRGAVRALAFSPSGTHLASAGDDKKI
KVWDLAACTCVHEYRGHYGKVTSIDWSAVGKPTLTNRVSSDLSEMTTDNSILCSAGMDGI
VKVVWDSQLKNNQLSSPDNSTSTYNTKCNYLVDIQVHPDWMVAIGTKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaatagaaacgatgccgttaaagccgttgttacttcctacttagaacgtaga
aattatccagatattgatatatttaataccaacaattctataagccaaagtgcagaggaa
atggcggtagctactattgtacagtgtgaatccagtcgtgctaattctgtattgttttct
tgtattaataatgacccaggccagtatgatattcaatatacaaggctatttaattttata
aaagaacttaaaatagagcaagtaagaagtgaactactgggcttattaacaccacttctt
tgtcacttgtacttggaaatgttaagaggtggtcatagtggacctgcgcaaatgtttttg
aagcgacattcagcatcacttcctcagaaagatttatcttaccaccaaccaattgatggt
aacctaccatcagctctctataggcccaacagcttagaacagctatttaattctatacaa
aatggtactattgataatgaaacacctgagaaagattacatgaatcaactgcttgatgac
attgggtcagtttatagtcttcaggagatagaaacaaggccaactattgcagcatttagg
tcttgtaaatttgacatttgtttgtcccaagattccttgaacatgcttaaggcatattta
gcaaaacatggtcatgttttaatgatacaggtattgcagacttggtttcacatagatgtt
aatggagaaaattgtaaaagtaatactgaggatgaagaagaagaggattcaaaggataaa
atcaaaattgaactcaatataaatgaaaatataagtgatgtgttttctaaatgtaacgga
cattctgaatatgcagtcgataaagaactaagggatcttcaagatgcaataaagggagta
agggaatctctggcgccattaaaattgtataaaatagcagcccctgatactgaattaata
tgtgcaaaaactgaccaatactgtaatgttttatgcggaggatttagtaactcagaaata
agactgtgggacctcggtcagaataatattaatcgacgcattaatagaaatatatcagaa
atagagttagcatgtagcgttccaccagatccagaaataaatgataatacaaggcaaata
ggtacaggcattcccttacgaggtcattcgggccctgtacaagcagtcagcattttgtcc
agagaggaattagttctttccgcctcacatgacagtacaatgagggcatggcgaatatca
gactattcttgtgcatctgtttataggggtcataattatccaatatggtgtttggatgta
tcaaaaaatggattattcatagtaactgggtcacacgacaggacagctaagttgtggtca
cttgatagaacattccctgtgagaatatttgttggacacatgtctgacgtcacgtgcgta
aaattccaccccaacgaggcgtacgtagcaacgggaagtgcggaccgatccgtgcgtctc
tgggcagtatgcgacgcaagactagtacgcgtactttgctcgcaccgcggggccgtaaga
gcgcttgccttttcgccaagtgggacgcatctcgcctctgcaggcgatgacaagaaaata
aaagtatgggatttggccgcatgcacatgtgtacatgaatacaggggccattatggaaaa
gtgacatccattgattggtctgcagtaggaaaaccaactttaacaaaccgagtatcttca
gacctaagcgaaatgaccacagataactctatcctatgttcagctggaatggatggtatt
gtgaaagttgtttgggatagtcaattgaaaaacaatcaattatctagtccagacaattca
acatcaacttacaatactaaatgtaattatttagtagatattcaggtacatcctgattgg
atggttgctataggtactaagaaatga
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integrated database retrieval system
