Pieris brassicae (large cabbage white): 123709206
Help
Entry
123709206 CDS
T08632
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123709206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123709206
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123709206
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123709206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
123709206
NCBI-ProteinID:
XP_045516272
LinkDB
All DBs
Position
5:10698252..10713826
Genome browser
AA seq
671 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWKKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLENRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSTWLVSSIDALNLQIDLFESEVESLVVGKKKRLDKEKQDRMDDLKSKLERHRYHIK
KLEMLLRMLDNMSVEVDQKSIPLQIKGIKEDVEYYISSSQDPGYEENEYIYEDIRGLDEI
ELSGVGVPSSATTDSNNSNDSPRSPTSMLSGTSPLTSPAELHNHTSESVDIDKKKKDESI
KPVKPLPLRALSCGAAASPNLSALNHSATNNSVNSTGVSGTSTPIKQPPPSSPHQRPNNT
VVWSVAEVCENGPVSATPHQHATAPAKSSSATTLASAIANPNPNVSVNTSTVSNVSTHSA
TPTPPSPVMLNGPINAHHTPQHMLNNGRASETPSTPALSTLSAASVSSGASTQPPDPLAT
TTLKSMAQEAVHRAGLQQNTRRGVPLSQAHIPPLLGVAPLGPVPLSSEQQVQYQMLETAF
YHMPHPSDSERTRVYLPRNICQTPAYYNQVLLPHSDTVEFFQRLSTETLFFVFYYMEGTK
AQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTF
EYKYLEDRDLN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaaggaaactgcaaggtgaaatagacaggtgtttaaaaaaggtaacagaa
ggggttgaaacatttgaagatatttggaaaaaagtacataatgcgacgaacagtaatcaa
aaagaaaaatatgaggcggatctcaagaaagaaattaaaaaactccaaaggctacgagat
cagattaaatcatggattgcatcaggagaaattaaggataagagtactcttttagaaaat
aggaaactcatagaaacacaaatggaaaggtttaaagtggtcgaaagagaaacaaagaca
aaagcgtattcaaaagaaggtctcggtgcagctcagaaactcgaccctgctcagaaggaa
cgggaggaaatgtcgacgtggcttgtgtcatctattgatgcgcttaatttacaaattgat
ctctttgaatctgaagtggaatcgctcgtagtgggaaagaagaaacgactggacaaggag
aaacaggatcgaatggatgacctcaaatcgaaactggaacggcacaggtatcacattaag
aagctggagatgctgctgcggatgctggataacatgtctgtggaagtggatcaaaaatcg
atcccattacagataaagggtattaaggaggacgtggaatattatatatcgtcatctcag
gacccaggttatgaggagaacgagtacatctacgaagatatccgcggcttggacgaaatt
gagctaagcggggttggagtgccgtccagcgcgaccacggatagcaataacagcaatgac
tcacctagatctcctaccagcatgctttcaggaacgagcccgttgacgtcccccgcggag
ctacacaaccacacgtcggaatctgtcgatatcgataaaaagaagaaggacgagtcgatc
aaaccggtaaagccgctgccgctccgcgccttatcgtgtggtgcggccgctagccccaac
ctgagcgcgctgaaccactccgctaccaacaatagtgtaaacagtaccggcgtgtcaggg
acgtcgacgcccatcaaacagcctccgcccagttcacctcatcagcggcctaataatact
gttgtgtggtctgttgcagaggtgtgcgagaacggccccgtgtcagccacgccccaccag
cacgccactgcgcccgcgaaaagttcatcggcgacgacgctcgcgagcgcgatcgcgaat
ccaaacccgaacgtaagcgtgaatacgagtacggtcagcaacgtcagtacgcatagtgcc
acgcccactccgccttcgccggtcatgctcaatggaccgatcaacgcccatcatacgcct
caacatatgctcaataacggccgagcgagcgaaaccccaagcactccagcgctgagtacg
ctgagtgcggcgagtgtaagtagcggcgctagtacacagccgcctgacccacttgccact
accacgctcaagagtatggcgcaggaagccgtgcatcgggcgggtttgcagcaaaataca
agacgaggtgtaccattatctcaggcgcatattccacctttattaggagtcgcgccctta
gggcctgtaccacttagttcggagcagcaagtacagtaccagatgttagaaacagctttc
taccatatgccacacccctcagattcagagagaacgagggtatatcttcctcgaaatatc
tgtcagacgcccgcctattataatcaggtgctgttaccccattcagacacagtagaattc
ttccagagactctcaacagagacattattcttcgtgttctactacatggagggcacgaaa
gcccaataccttgccgcgaaagctctgaaaaagcagagttggcggttccatacgaaatat
atgatgtggttccaaaggcatgaagagcctaaggtcatcaatgaggaatatgagcagggc
acgtacatatactttgactacgagaagtggggccagcggaaaaaagaaggcttcacgttt
gagtacaagtacttagaagaccgtgacttgaactga
DBGET
integrated database retrieval system
