Pieris brassicae (large cabbage white): 123709395
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Entry
123709395 CDS
T08632
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123709395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123709395
03041 Spliceosome [BR:
pbx03041
]
123709395
03036 Chromosome and associated proteins [BR:
pbx03036
]
123709395
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123709395
Spliceosome [BR:
pbx03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
123709395
Complex B
123709395
Complex C
U2 SnRNP specific factors
123709395
Chromosome and associated proteins [BR:
pbx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
123709395
TFTC complex
123709395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
GtgE
Motif
Other DBs
NCBI-GeneID:
123709395
NCBI-ProteinID:
XP_045516657
LinkDB
All DBs
Position
5:3782311..3790810
Genome browser
AA seq
1215 aa
AA seq
DB search
MFLYNLTLQGSTAITHAVHGNFSGTKQQEIAISRGKILELLRPDPNTGKVYTLMKVEIFG
IIRSMMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGATEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACQVADLTGEDT
PQVYLACGRGPRSSIRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLTDNTVRIISLDPADCLSPRSMQALPASPESLCIVDQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAVSSRTWLGYQYQNR
FHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQNYVPLEYTPRKF
LINGDTNHIIILETDHNSYTEEMKKQRRVQMAQEMREAAAGGGPEEQQLANEMADAFLSD
ILPENVFSSPKAGAGMWASQIRVVDMSSGEASTLCKVQLEQNEAAVSVCIVRWAAHGEHA
VPHLVVGVAKDMVLSPRTCTEGSLDVYKIYNTGKLELVHKTPVDEYPGALAAFNGRLIAG
VGRMLRLYDIGRRKLLRKCENRHIPNLIVDLKTNRQRIFVSDVQESIFCVKYKKRENQLI
IFADDTNPRWITNTCILDYDTVAMSDKFGNVAIMRLPHSVTDDVDEDPTGNKALWDRGLL
NGASQKGDMVANFHVGETITTLHRATLIPGGSEALLYATLSGSLGVLLPFTSREDHDFFQ
HLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPSKQKAIAGDLERTPA
EVSKKLEDIRTRYAF
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtataatcttacgctccagggctccacagccattactcatgccgtacatggg
aatttctctggcaccaagcagcaagagattgctatatcgcgtgggaagatattggaactc
ttgcgtcccgacccaaacactgggaaagtgtatactttgatgaaagttgaaatattcggc
attattcgatccatgatggcatttagattgacgggcggtacaaaagattacattgtagtt
ggatcagattctggaagaattgttatattagagtacataccagctaaaaatattttggaa
aaagtacatcaagaaacatttggtaaatctggttgtaggagaattgttccaggacagtat
ttagcaattgatcctaaagggagagcagtaatgatcggtgcaactgagaagcaaaagttg
gtttacattttaaacagagatgcagaagctcgtctgactatttcatctccactggaggca
cataaatctaacactttagtatatcacatggttggtgttgatgtgggctttgaaaatcct
atgtttgcctgtttggaaattgattatgaagaagcagactctgatcccacaggtgaagca
gcacagaaaacacaacagacacttacattttatgaacttgatttgggattgaaccatgtt
gtgcgtaaatattcagagccattggaagagcatgctaacttcctcataactgtgcctggc
ggtaatgatggtccttcaggagtattgatttgttcagaaaactatttaacttacaaaaac
ctcggagaccaacacgacatcagatgtcctatccccagacgtaggaatgacttggatgac
ccagaacggggaatgatttttgtctgctctgccactcataaaacgaaatccatgttcttt
ttccttgcacaaacagagcaaggagatatatttaaaatcactatagaaactgatgaggac
atggtaactgaaattaagctaaaatactttgacactgtacctgtcgcaacatctatgtgt
gttttgaagacaggatttctgtttgttgcctgtgaatttgggaaccattacttatatcaa
attgcacacttgggagatgaagatgatgagccagagtttagttctgctatgcctttagaa
gagggtgacacattcttctttgcaccaagaccactgagaaatttggtacttgttgatgaa
ttggactccctttcgcccattctagcttgtcaagtggctgatttaactggtgaagataca
cctcaggtgtatttagcgtgtggtcgtggcccaagatcttctataagagcgttgcgacat
ggtctcgaggtggccgagatggctgtttcagaactaccagggtccccaaatgcagtatgg
actgtgcggaggcataaagatgacgattatgattcttacatcattgtgtcgttcgtaaac
gctacacttgtgctctctatcggcgagactgtagaagaagttacggattccggtttcctg
ggaactactccaacgctcagttgccacgctctcggcagcgacgctttagttcaagtttat
ccggatggtataagacacattcgcgcggacaaaagagttaacgaatggaaagctccagga
aagaaatctatagttaaatgcgctgttaaccaacgccaagtcgtcattgcgttgactggt
ggagaactggtttactttgaaatggaccctactggccaacttaatgaatatacagagaga
aagaagttatcatccgatgtatcctgcatggccctaggatctgttgctacaggagaacag
agagcctggttcttagcagtggggcttactgacaatactgttcgaattatttcattagat
ccagctgactgcctttcgccaagatctatgcaagctttaccagcaagtccagagtcattg
tgtattgttgatcaaccatttgagtctggcgctaagtctgcgttacacttgaatattggt
ctcagcaatggggtactattaaggacaaccttagattctgtcagcggagatttagcagac
accaggacaaggtatttggggtctcggcctgtgaagttgttcaaagttcgagtgcagtcg
gctgaagcagtgctagctgtgtcatctaggacgtggcttggataccagtatcaaaacaga
ttccaccttacaccactttcctatgaatgtttggaatatgctgccggttttagttcagaa
caatgtaccgagggtatcgtcgctatctcatcaaacacattgagaattttggccttagaa
aaattaggagctgtcttcaatcaaaattatgtcccactggaatatactcctcggaaattt
ttgatcaatggagacacaaatcatattatcattttggagactgatcacaattcttataca
gaagaaatgaaaaaacagagaagagtccaaatggcacaagagatgcgcgaggctgccgca
ggaggtgggccagaagagcaacaattggccaacgaaatggcggacgcgtttttgtctgac
attcttccagaaaatgtattttcttcacccaaagctggtgcaggcatgtgggcgtcacag
atccgcgtagtggacatgagcagcggcgaggctagcaccttgtgcaaagtgcaactggaa
cagaacgaagccgcagtgtccgtgtgtattgtgcgttgggcagcccacggagaacacgca
gttccgcatttggttgttggagtcgccaaggatatggtgctgtctcctaggacttgtacc
gagggcagccttgatgtttataagatatataacacaggtaaattggaattagtccataaa
actccagtagacgaataccccggagcattagctgccttcaatggacggcttatagctgga
gtaggtcgaatgcttcgtttatacgacattggtcggcggaaacttcttagaaaatgcgaa
aacagacacattcctaacctaatagtagacctaaaaacgaataggcaaagaatatttgta
tcagatgtgcaagaatccatattctgtgtaaaatacaagaaaagggagaaccagttgatc
atatttgctgatgatacaaatcctagatggataaccaatacgtgtatcctcgattatgac
acagtagctatgtcggataagtttgggaatgttgctattatgcggttgccgcactccgtc
actgatgatgtcgatgaggatcctactggaaataaggctctttgggatagaggattactg
aatggagcatctcaaaagggagatatggtggcaaatttccacgttggagagacaataact
accctacatagagctaccctcattcctggcggttcagaggccctattgtatgctactttg
agcggatctctgggagtccttttaccgttcacttcaagggaagaccacgatttcttccaa
cacttggaaatgcatatgagaagtgaaaattcccctttgtgtggcagagatcatttgtcg
tttaggagctactactatccagttaagaatgtcattgatggagacttgtgtgaacaattt
aattctctggagccgtcgaaacaaaaggcgatcgccggcgacctcgaaaggacgcccgcc
gaggtgtcaaagaaacttgaagatattagaactcgctacgccttctaa
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