Pieris brassicae (large cabbage white): 123709409
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Entry
123709409 CDS
T08632
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pbx
Pieris brassicae (large cabbage white)
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbx03009
]
123709409
Enzymes [BR:
pbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123709409
Ribosome biogenesis [BR:
pbx03009
]
Eukaryotic type
Pre-60S particles
Helicases
123709409
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Col_cuticle_N
Motif
Other DBs
NCBI-GeneID:
123709409
NCBI-ProteinID:
XP_045516680
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All DBs
Position
5:5495838..5506986
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AA seq
561 aa
AA seq
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MAGENKVMFHEMELDDRLLKAISQLGWSTPTLIQETAIPLLLEGKDVLMRARTGSGKTAA
FTIPVIQKILNLKNTSLHQCISSLILSPSKELCGQIASVVSELTLKCSREVRCIDISSNT
NTQIQKSLLLDKPDIVVATPARALAHLKAGNMNLKDDLAMLIVDEADLVFSFGYEDEVKE
LLGYLPKIYQAVLASATLSDDVINLKKIVLRNPVTLKLEEPELAPSSQLQHYHLFAEEDD
KAAILYALLKLNLIRGKSIIFVRTVDRCYKLKLYLEQFKIGSCVLNSELPAAIRCLSVDQ
FNRGRYQIIVASDEKALEKPDGGLLKGEEIGKKNKQKSKRKKDKESGVSRGIDFQHVANV
INFDFPLDVTSYVHRAGRTARGHNQGSVLSFVSIREKPLLEEVEAHLSKGFNNQKVLQKY
SFALEEVEGFRYRSRDAWRAVTRIAVREARLQEIKRELLNCNKLKGFFEENPAELAAIKR
DKALHTVRVQEQLAHVPEYLIPGALRPSEPEASADCPAPPQAAKRKIQHSYGSAKRHKYQ
ARRNNPLQSFELKTLKKSTDT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgaaaacaaggttatgtttcatgaaatggaattagatgatcgcttacttaag
gcaatatcacagcttgggtggtcaactccaacattaattcaagaaactgcaatacctctg
ctattggaaggaaaggatgttcttatgagagccaggacaggatcaggcaaaactgcagct
tttactattcctgtaatacaaaagatactaaacttaaaaaacacaagtttacatcaatgc
atatcgagtctaattttatcccccagtaaagaattatgtggccagatagcttcagttgta
tcagagctaacactaaaatgttcaagagaagtcagatgtatagatatatcatccaacaca
aacacccaaatccaaaagtctctactgttagataaaccagacattgtggtagctacaccg
gctagagcattagcacatcttaaagctggtaacatgaatctgaaagatgatttagcaatg
ctaattgtagatgaggctgatcttgtattttcatttggctatgaagatgaggtgaaagag
ctgttggggtatttgccaaagatttaccaagctgtattagcttcagctacactatcagat
gatgttatcaaccttaaaaagatagttcttaggaacccagtgacattgaaattagaggaa
cctgaattggcaccatcctcccaattacaacactaccacctattcgcggaggaagatgac
aaagcagcaatattatatgccttgttgaaacttaatttaataagaggcaaaagcattatc
tttgtaagaactgttgacagatgttataaattaaaattatatttggaacagtttaaaatt
ggctcatgtgttttgaattcggaattgccagctgccatccgatgtctgtctgtggaccag
tttaacagaggtcgctatcaaattattgtggcctccgatgaaaaagctttagaaaaaccc
gatggtggattacttaaaggggaagaaattggcaagaaaaataagcaaaaatctaaacgt
aaaaaagacaaggagtccggagtatctcgtggtattgattttcaacacgtagccaacgtc
attaattttgatttccctctggatgtcacatcttacgtacatcgagcaggacgaacggca
cgcgggcacaatcaggggtcagtgctatcatttgtatcaataagagagaaacctttacta
gaagaggtggaggctcacttgtccaaagggttcaacaatcagaaagtgttgcaaaagtac
tcatttgcgttagaagaagtggaaggttttcgttaccggtctagggatgcctggcgagcc
gtcactcgcatcgccgtgagggaagcacgactacaagagattaagcgggaactgctgaac
tgcaacaagttaaagggattcttcgaggaaaacccggctgagttggcggcgattaaacga
gacaaggccctacacacggtcagagttcaagaacaattggcccatgtcccagaatattta
attcccggggcactccgaccgtctgaacctgaagccagcgcagactgcccggcgccccca
caagctgctaaaagaaagatccaacacagttatggcagcgctaagcgtcacaagtaccag
gcgcgacgcaacaacccgctgcaaagcttcgaactaaagacactgaagaaatcgacagac
acatag
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