Pieris brassicae (large cabbage white): 123709767
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Entry
123709767 CDS
T08632
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03430
Mismatch repair
pbx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123709767
03460 Fanconi anemia pathway
123709767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123709767
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
123709767
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
ExsD
NEW1_HB
Motif
Other DBs
NCBI-GeneID:
123709767
NCBI-ProteinID:
XP_045517260
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Position
5:complement(3821079..3826905)
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AA seq
875 aa
AA seq
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MNQENIKPINRDTVHKICSGQVVLSLAVAVKELLENSLDAGATNVDIRLKNYGIDLIEVS
DNGSGVTEDNMAALTLKYHTSKLNDYSDLLGVTSFGFRGEALSSLCSLANLTIITRHHTS
SYATKIQYDNKGNILSKTPCSRQVGTTVTLTNLFTSLPVRQKEFHKNSKREFNKMTNLLY
AYCCISKGVKITCSNQTQSNSKSVVLATTGSQSYKDNIASVFGHKQIQSILEINTENVSN
IKENIFKGLSAELKEHNETIEIEDVEIDLSEDSNDADANKTHNDQSDSFSLSQKSQGYKN
IPSPVELEGFISSCEHGSGRSSTDRQLYYVNSRPCEPTKIIKLVNEIYKQYNSNQYPFVF
LNIIIDRVTVDVNVTPDKRKVFLTKEKAILDVVKASLIKLFENIPSTLKLNSTFSEDHSK
VIVPNLSQPRIFNSFMQQFNKNDEGRTNLSEISEKDKSNDLKRKLPSNSDSLIPKIKRIY
ETDDKNNDNEIPINNELSEESSNNNCPKATLKQDIDYVKVIPSSSETSNNNVQDYKKLSD
FLEATSTNKPENKDNLVSKHIIYLESTEKLPATQILTLSNVITKDLHTIYCKTKDPNKET
AKEKLQEIKTFDIKKVKTDHNDLGKTSKQFVTFKTSLEQVKCLTEIYNMKSKKQLPERVK
FKSRIDPVFNKKCEEELNREISKHSFNEMQVIGQFNLGFIITRLGDDLFIIDQHATDEIY
NFETLQKTTELTSQKLVIPQQLELTGVNEEILMDNLDIFKKNGFTFDIEENAPVTKRVKL
LTLPMSKNWIFGKDDIEELLFMLKESPSEYCRPSRVRAMFASRACRKSVMIGTALSKADM
KQLIDHMSEIDKPWNCPHGRPTIRHLVNLAMVYTC
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaaatataaaacctataaacagggatacggtgcataaaatatgttctggg
caggttgttcttagcttagcggttgctgtgaaagagcttttagaaaattctctggatgct
ggggcaacaaatgttgatattcgccttaagaactatggtatagatcttatagaagtttct
gacaatggttctggagtaactgaagataatatggctgctttaacactgaaatatcatact
tcaaagttaaatgactactcagatctacttggagttactagctttggcttcagaggagaa
gctttgagttctctttgctcattggcaaatcttacaattatcactagacatcatacaagt
agctatgcaactaaaatacagtatgataacaaaggcaatattttaagtaaaacaccatgc
tcaagacaagtaggaactactgttacattaacaaatctgtttacctctctacctgtaaga
caaaaagaatttcataaaaattctaaaagggaatttaataagatgactaatttattgtat
gcatactgttgtatatcaaaaggagttaaaatcacttgcagtaatcagacacaatcaaac
tcaaaatcagttgtactagcaactacaggttcacaatcatataaagacaacatagcatct
gtctttggtcataaacaaattcagagtatactagaaattaatacagaaaatgtatctaac
atcaaagaaaacatatttaagggcttatcagcagaactgaaagaacataatgaaacaatt
gaaatagaagatgttgaaattgatttgtctgaagattctaatgatgctgatgcaaataaa
actcacaatgatcagagtgatagcttttctttatcacaaaaatcacaaggttataaaaat
attccaagcccagttgaattggaggggtttatatcttcttgcgaacatggaagtggaagg
tctagtacagatagacaattgtattatgtcaattctaggccatgtgagccaacaaaaatt
attaaactagtcaatgaaatatataaacagtataattcaaatcaatatccatttgtgttt
ctcaatataattattgatagagttactgttgatgtcaatgtaactccagataagagaaaa
gtatttcttactaaggaaaaggccattttggatgttgtaaaggcatctttaataaaactt
tttgagaatatccctagtacattaaaattaaattccacttttagtgaagaccattctaaa
gtgatagtgcctaatttaagccaacctagaatctttaattcctttatgcaacaatttaat
aaaaatgatgaaggaaggactaacttgtctgaaatatcggaaaaggataaatccaatgat
ttaaaaagaaaattaccatcaaattcagacagtttgataccaaaaataaagagaatttat
gaaactgatgataaaaataatgataatgaaatacctattaataatgaacttagtgaagaa
agttcaaacaataattgtcccaaagccacactaaaacaggatatagactatgttaaagtt
ataccatcttcatcagaaacatcaaataataatgttcaggattataagaaactttcagat
tttttggaagcaactagtactaataaacccgaaaataaagataatctagtatcaaaacat
ataatttatttagaatctacagaaaaattaccagcaacacaaattttaacactatcaaat
gtaataacaaaagatttgcatacaatatactgtaaaacaaaagatcccaataaggaaact
gctaaagagaaactgcaagaaataaaaacttttgatattaaaaaagtgaaaactgaccac
aacgacttaggaaaaacgtctaaacagtttgttacctttaaaacatctttggaacaggtt
aaatgtttaaccgaaatttataacatgaaaagcaaaaagcaattacctgaaagagtaaaa
tttaagagccgcattgatccagtgtttaataaaaaatgtgaagaagaattaaatagggaa
atatctaaacattcatttaatgaaatgcaagtgattggtcaattcaatctaggatttatc
attacccgcttaggtgatgaccttttcatcatcgaccagcatgctaccgatgagatttat
aattttgagactttgcaaaaaactactgaactcacaagtcaaaaattggtaatccctcaa
cagcttgagctcactggtgtcaatgaggaaatattaatggataatttagacatatttaaa
aaaaacggttttacgtttgatattgaagaaaacgctcccgtaaccaaaagagttaaatta
ttaacattaccaatgtctaagaattggatatttggcaaggatgatattgaagagctttta
ttcatgctaaaggaatctccatcagaatactgtaggcctagcagagtaagagccatgttc
gcgtcgcgagcttgcagaaagtctgtcatgataggcacagctcttagcaaggcggatatg
aaacaattgattgatcacatgtcagaaatcgacaagccctggaattgtccacatgggagg
ccaacaatacgccatttggttaatttggctatggtttatacctgttaa
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