Pieris brassicae (large cabbage white): 123709913
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Entry
123709913 CDS
T08632
Name
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
Organism
pbx
Pieris brassicae (large cabbage white)
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GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
123709913
NCBI-ProteinID:
XP_045517472
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Position
5:3380387..3511442
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AA seq
1191 aa
AA seq
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MIAMENIRLFMSTKHFSRLLCLSLLLHSTHSFGNEGLFSSKYPNDIPEYDLLHAIGVPFS
NPKTQYFDEGLDGFPAYGLKPGSDIKSPYRLFMPEKLYAEFSITATVRPANKDGGFLFSV
VNPLETVVQLGVQLIPSGPGLTNISLLYTDANIYALSQTIASFVVPSFSKKWTRFALRVT
NDNVTLFLNCLEFDTVVVKRNPQELVFDSASTLYVGQAGPLISGAFHGAFQELKLFGSPS
QAEVQCVNTFEDIGKGGEGDEIYIDNSLVDQEDGDVEGSGRYGTIPPFPPPPPGLNGYAP
ILRGEKGERGPRGLPGESIRGPPGPPGPPGLPGIPGTAMVESSGDDAMNIKQIFGENYAS
IGQCGCNSSTLMALLELAPELRGPPGPPGVTGAEGRIGPPGIPGQMGPTGERGPIGPRGE
KGDRGDEGPRGPEGITGPKGEPGVDGRPGTAGPPGPPGSPGSSDYGNFEESLLGAYGGGG
VGRPGAPGPKGDAGQSGPAGLQGERGFAGAKGERGLPGQSGFKGDRGYPGPKGDRGVKGD
RGGPGLDGRPGLPGANGRFGEKGEKGERGSPGPPGPPSTPVAGFTTEDSEFLSTGRVVAG
LQGEKGEKGEKGDPGKDGIPGFPGKDGKSGERGDIGPSGMPGMSGPPGASGLKGERGERG
PPGPVSITSGGSDIITVKGEKGDLGPRGRRGRSGPQGPRGLQGPPGVPGPPGKAGDKGEI
GLPGWMNNKGRPGTFGPPGNTGPKGEKGDPGVNILDVSMFKGEKGDRGDNGYPGPKGIQG
PPGPPGIAPKSDVVQYVPGPPGPPGPPGSPGLAIVGPKGEPGLSYIEEGPIHGSTKFFGR
PVQKSAFDELKALTELKELKEKTKERLGRDNFESRSHHADESSKTVPGASVFRTTEEMMR
LASSSPVGALAYVMEEQVLFLKVNTGWQYVLLGSVVSQAAPLTTTHSPVTPPMPAASLVH
RGPISNLVDSPVLAPVGPSLRLAALNEPLSGNMHGVRRADYACYRQARRSGLKGTFRAFL
TSRIQNLDSTVRYADRHLPVVNIMGEVLFKSFSDIFDGNGGFIAGTPRIYSFSGKNIMMD
SNWPQKLIWHGSHASGERALDTFCEEWQNGEPTSRGMAASLYSHKLLSQERYSCNNHFAV
LCIEATAHLNSRRKRSIFRYNSTHDDEDYLYNAEEYQELLNDIFAQPFRED
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgatggaaaatataaggttgttcatgtctacgaagcatttttcaagattgctg
tgtctgtcgctactcctacattcaacgcacagcttcggcaacgagggactttttagttca
aaatatccaaacgatatccccgaatacgacttgctgcacgctatcggagttccatttagc
aatccgaagacccagtacttcgatgaaggcctcgacggttttccggcttacgggctcaag
ccgggatctgatattaaatctccgtatcgactctttatgcccgagaaactttacgctgaa
ttctctataacagccactgtacgaccggcaaataaggatggcggattcctcttttctgtc
gttaaccctttggaaactgttgtccagttaggtgtacagcttataccgtctggtcccggg
ttgacgaatatttctttgttatatacagatgcgaatatttacgccttatctcaaacaatc
gcttcgtttgtggtaccttcgttttctaagaagtggacacggttcgcattgagagtaaca
aatgataatgttacgttatttcttaattgcttagagtttgatacggttgttgtaaagagg
aatccgcaggaattagtctttgattctgcttcgactttgtatgtcggtcaggcgggtcca
ctcatctctggagctttccatggtgcgtttcaagagttgaagctttttggatcgccttca
caagccgaagtacagtgtgtgaacacatttgaggatataggcaaaggcggcgaaggagac
gagatttatattgacaattcattggtggaccaagaagacggggatgttgaggggtctggg
aggtatgggacaattccgccatttccgcctccaccacccggacttaacggttatgcccca
atcttaagaggtgaaaagggagagagaggaccaaggggtttacccggagaatcgatacga
ggaccaccgggaccaccaggacctcctgggcttcctggtattcctggaacagccatggtt
gaatcgtctggagatgacgcgatgaatataaagcaaatttttggtgagaactacgcgtca
attggacaatgtggctgcaacagcagcacactaatggcactcctcgagttggcaccggaa
ctccgaggtcctccaggtcctccgggggtcactggcgccgaaggacgaattggaccacct
ggcatacctggtcaaatggggccaaccggtgaacgcggcccgataggtcctcggggcgaa
aagggtgatcgaggggatgaaggtccccgtggtccagaaggcataacgggaccaaaggga
gagcctggcgttgatggaagacctggtactgcaggaccacctggaccacctggatcgccc
ggttcatctgactacggaaactttgaggaatcacttttgggggcttacggcggaggtgga
gttggcagacccggggctcctggtcctaagggggatgctggccaatcagggcccgctgga
cttcaaggagaacggggatttgccggagctaagggtgaacgtggccttccaggccaaagt
ggatttaaaggcgatcgtggttatcctggccctaaaggtgacagaggagtaaaaggtgac
cgtggtggtcctggcttggatggccgtccaggactaccgggggcaaacggacgctttggt
gaaaagggagaaaaaggtgaacgtggctcacccggaccgccgggacctccatcgactcct
gtcgcaggtttcacgacagaggattcagaattcctttcgactggtcgagttgttgccgga
ttacaaggagagaaaggcgaaaagggtgaaaagggtgaccctggaaaagatggcatacca
ggttttccaggaaaagatggaaagtcaggagaacgtggagatattggcccttcaggaatg
cccggtatgtctggacccccgggcgcttcaggtttaaaaggagaaaggggagagagaggc
ccaccgggaccggtatcaataacatcaggcggttccgacattattacagtcaagggcgaa
aagggagatctaggacccagaggtaggagaggccgatctggaccacaaggaccccgagga
cttcagggtccaccgggtgtgcctggacctccgggaaaagccggagataaaggtgaaatc
ggacttcccggttggatgaataataagggacgaccgggtacatttggtcctcctgggaat
accgggcctaaaggtgaaaagggagacccaggcgtgaatattttggatgtctcaatgttc
aagggtgaaaagggagatcgtggtgacaatggatatccaggccccaaaggtattcagggt
ccaccgggtccaccaggcattgctccaaagtcggatgttgtccagtatgtgccaggtccg
ccagggccccctggacctcccggatctccgggtctagctatcgtgggtcctaaaggagag
cccggactcagctatatagaagaaggccctattcatggcagtacaaagttcttcggcaga
ccagttcaaaaaagtgcttttgacgaattaaaagctcttacagaattaaaagaactaaaa
gaaaagactaaagagcgtcttggtcgagataatttcgagtcaagaagtcaccatgcagac
gaatcaagcaaaacggtaccaggtgcgtcggtatttcggaccaccgaagagatgatgcgg
cttgcttcttcgagtcccgttggtgcattagcctatgtcatggaggaacaagtcctgttc
ctcaaagtgaatacaggatggcaatatgttttgctcgggtcagtagtgtcccaagcagca
ccgttgacaacgacgcactcacctgtcacacccccaatgcctgcagccagtcttgttcac
aggggaccaatatccaatttagttgattcgcctgtactcgctcctgtcgggccaagcctc
cgtttagccgctctaaatgaacctctatcaggtaacatgcatggagtacggcgcgctgat
tacgcgtgttatcgccaagccaggcgctccggtttaaagggaactttcagagcttttctt
acgagcaggatacaaaatctggactccacagtacgttacgcggacagacatttaccagtg
gtcaatataatgggagaggtcctattcaaatcattttctgatatttttgatggaaatgga
ggttttattgcgggtactccacgaatatacagctttagcgggaaaaatattatgatggat
tctaattggccacaaaaactaatatggcacggctcacacgcaagtggggaacgcgcgttg
gacacgttctgtgaggaatggcagaatggagagcccacatccaggggcatggctgcgtca
ttatattcacacaaactgctctctcaagaaaggtattcgtgcaataatcacttcgcagta
ttatgtatagaagccacagctcacttaaattccagaagaaaaagaagtatattcaggtac
aattcaacgcatgacgacgaggactatttgtacaacgctgaggaatatcaagagctgctt
aatgatatatttgctcaaccatttagagaagattaa
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