Pieris brassicae (large cabbage white): 123710033
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Entry
123710033 CDS
T08632
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123710033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbx03041
]
123710033
Spliceosome [BR:
pbx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123710033
Complex C
U5 SnRNP specific factors
123710033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
123710033
NCBI-ProteinID:
XP_045517653
LinkDB
All DBs
Position
5:9521589..9549222
Genome browser
AA seq
2364 aa
AA seq
DB search
MSLPPYLLGPNPWATMMAQQQLAAAQQAALQAHAAAAAAAPPVPPAQPPKPHHIPEEKIK
EKATKWLQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGA
LKYMPHAVMKLLENMPMPWEQIRDVQVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMM
RREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQIELDPEEDGAVASWFYDHK
PLLGTIHVNGSTYRKWNLSLPQMATLYRLANQLLTDLVDDNYFYLFDSKSFFTAKALNMA
IPGGPKFEPLVKDNSAGDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPHFVQLSWY
HTPNVVYIKTEDPDLPAFYFDPLINPISHRHSVKSLDPVPEEEDFVLPEEVSPFLQETAL
YTDNTANGIALLWAPRPFSMRSGRCRRAIDVPLVKTWYKEHCPPGQPVKVRVSYQKLLKY
YVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLNNVDSFQ
LADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVSKGPGCGFWAPG
WRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDI
VDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKMKADWWTNT
AHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTT
VHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDN
PHEALSRIKRHLLTQRTFREVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKR
RLLPPWVKPADTEPSPLLVYKWCQGINNLQDVWEVGEGECNVLLESRFEKLYEKIDLTLL
NRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVL
GLQRASEMAGPPQLPNDFLAYQDRPVESAHPIRLYCRYVDRIHIFFRFSAEEARDLIQRY
LTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENS
FVSVYSKDNPNLLFNMAGFECRILPKCRSQNEELSHRDGVWNLQNEVTKERTAQCYLRVD
DESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCEN
KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHF
RSGMSHDEDQLIPNLYRYIQPWEAEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWD
RGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTD
MIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRR
FTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDL
CQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADTKDTMD
NTTTQKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHS
AYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFS
NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL
GQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPF
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVL
LKPDKTTLTEPHHIWPTLSDDDWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILG
MEISAPSAQRQQIAEIEKQSKEQSQLTATTTRTVNKHGDEIITSTTSNYESQTFSSKTEW
RVRAISATNLHLRTNHIYVSSDDIKESGYTYILPKNLLKKFVTISDLRAQIACYLYGTSP
PDNPQVREVHCAVLPPQWGTHQTVHLPKHLPKHPALAHLQPLGWMHTQPNELPQLSPQDI
TAHAKVMADNQTWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGVKNTDRGNNPKGYLP
SHYEKVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAH
FMNFAAMEDATAPTIAADREDHYA
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccgccttacttattggggcccaacccctgggctaccatgatggcgcagcaa
cagctggcggcggcgcaacaggccgctttacaagcgcacgctgccgctgctgcagctgct
ccgccggtccctccggctcaaccaccaaaacctcaccacattcctgaggagaagattaag
gaaaaggctacaaaatggcttcagcttcaatcaaagcgttttgcggaaaaacgcaaattt
ggttttgtggatgctcaaaaagaagatatgccacctgagcacatacgcaaaatcatcaga
gaccatggtgatatgacaagtcgtaaatacagacatgacaagagagtgtatcttggagca
ttgaagtacatgccacatgctgttatgaaattacttgagaacatgccaatgccctgggaa
caaatcagagatgtacaagttctataccacattacaggagctataacatttgttaatgaa
ataccctgggtaattgagcctgtatatattgctcaatggggcactatgtggattatgatg
aggcgtgaaaaaagagatcgtcgacacttcaaaagaatgagatttccaccgtttgacgat
gaagaacctccattagactatgctgataatatcttggatgttgagccccttgaaccgatc
cagatagagttggatcctgaggaagatggggcagtagcgtcatggttttatgaccacaaa
ccattattagggactatacatgttaatggatcaacatacaggaaatggaatttgtcattg
ccacaaatggcaacactttaccgtcttgcaaaccaactactgactgatttagtagatgac
aactatttttacttgtttgattcaaagagtttcttcactgcaaaagccttaaatatggcc
atacctggaggtccaaagtttgaacctctggtgaaagataactctgctggagatgaagat
tggaatgagttcaacgatattaacaagatcatcatcagacagccaatcagaacagaatac
agaatagcattcccatacctctataacaatttgccacattttgttcaactgtcttggtac
cacacacccaacgttgtgtacataaaaacagaagatccagacttgccagctttttacttt
gatcccctcatcaatccaatctcgcacagacattcagtaaagtccttagacccggtcccc
gaagaggaagactttgttttacctgaagaggtctcaccattcttacaagaaactgcattg
tacactgacaacacggcaaatggtattgcgctgctttgggctccaaggccttttagtatg
agatcaggtcgttgtcgtcgggccattgacgtgcctcttgttaagacttggtacaaggag
cactgccctccgggtcagcctgtcaaagtgcgagtctcgtatcaaaagttgcttaagtac
tatgtgctcaatgcactcaaacatcgcccgcccaaaccgcagaaaaagaggtacttattc
cgttccttcaaatctaccaaattcttccaaacaacaacattggattgggtagaggctggt
ctccaagtgtgtcgtcaaggatacaacatgttgaacttgctcatccatcggaaaaacctt
aattatctacatttggattacaactttaatttgaaacctgtgaagacactaacaactaag
gagaggaagaagtctcgtttcggaaatgcattccatctttgtcgagaaattctccgtctg
acaaaattaatagtggactcgcacgtccaataccgtctgaataacgtggactcattccaa
ctggctgatggtctacagtacatatttgctcacgttggtcagctgactggaatgtacaga
tacaagtacaaactgatgaggcagattaggatgtgcaaggacttgaagcatctgatatat
taccgatttaatactggcccagtgtcaaagggtccaggttgcggtttctgggctccagga
tggcgtgtgtggctgttcttcatgagaggcatcactccgctgttggagagatggcttggc
aacttactgtccaggcaattcgaaggaagacactccaaaggtgttgctaaaacggtgacg
aaacagcgtgtggaatctcacttcgacctggaattgcgtgcgtctgtcatgcacgatatc
gtggatatgatgccagaaggaatcaagcagaataaggcgaggacaatattgcagcatctg
tccgaagcctggaggtgctggaaggcgaatatcccttggaaggttccaggtcttccgacg
ccaatagaaaacatgattctccgatacgttaaaatgaaggcggattggtggacgaataca
gctcattacaatcgggaaagaatccgtcgaggagccaccgtagacaagaccgtgtgcaag
aagaatttgggaagactgacgaggctgtatctaaaggctgaacaggagagacagcataat
tatttgaaggacggtccctacatctctcccgaagaagccgtagcaatatacacaacgaca
gtccattggctcgaatctcgtcgatttgcgcccatccccttcccgcccctatcatacaaa
cacgacacaaaactgctcattttggccttagaaaggctgaaagaggcgtacagtgtcaag
tccaggctgaatcagagccaaagggaggaattgggattgatagaacaggcctatgacaac
ccgcacgaagcattgtcgagaatcaagagacatttgcttacacaaagaacgtttagagag
gttggtatagaattcatggatctatactcgcatttagtcccggtgtatgatgtggaaccc
ttggagaagatcacagacgcatatttagaccaatatctgtggtatgaagcggacaaacga
aggttgctgccgccatgggtgaaaccggctgacacagagccttcgccgctactcgtctat
aagtggtgtcaaggtattaacaatctccaagatgtatgggaagtaggtgaaggagaatgc
aatgtacttctggagtcccgctttgaaaaactctatgaaaagatcgatctgacccttctc
aatagattgcttcggttgatagtcgaccacaatattgctgattatatgactgctaagaat
aacgtcgttatcaattataaggacatgaatcacacaaactcatatggtatcatccgtggt
ctgcaattcgcatcattcatagtccaatactatggtctagtgctagatctgctagtccta
ggtctccaaagggctagtgaaatggccggacctccgcaactgccgaatgacttcctggct
tatcaagaccgtcctgtggagtcagctcatccaattagactgtattgcagatacgtcgat
cggattcatatattctttagattctcggctgaagaggcccgggatctcattcaaagatac
ctaacagagcatccggatccgaataatgaaaacatcgttgggtacaataataagaagtgc
tggcccagggatgctcggatgaggctcatgaaacatgacgttaatttgggtcgagcggta
ttttgggatatcaagaaccgtttacctcgttccgtgacaacgattcaatgggagaacagc
ttcgtctcagtttattcgaaagacaatcccaatttgctattcaacatggccggctttgag
tgtaggatactgcctaaatgccgcagtcagaacgaggaactgtcccaccgtgacggtgtg
tggaacttgcaaaacgaagtgacgaaagagcgaacggcgcaatgttatttgcgtgttgac
gacgaatccttagcgagattccacaacagagtcaggcagattctgatggcctcaggttcc
accacgttcaccaaaattgttaacaaatggaacaccgcgcttataggtctgatgacgtac
ttccgcgaagccgttgtaaacactcaagagttactcgatctgttagtaaaatgtgaaaac
aagattcaaacgcgtatcaagatcggtctcaactccaaaatgccctcacgtttcccgccc
gttgttttttacacgcccaaagagcttggcggtttgggaatgttgtctatgggtcacgta
cttataccacagtctgaccttcgctggtcgaaacaaacagacgtcggtatcactcacttc
cgttcgggaatgtctcacgatgaagaccagctgattcccaacttgtaccgatacattcag
ccgtgggaggcagaattcgtggactcacagcgtgtatgggccgagtatgctctgaagaga
caggaggcgaacgcgcaaaaccgacgtctaaccctcgaagatttagaagattcatgggac
agaggtattccacgtatcaacacgcttttccaaaaggacagacacacgctcgcgtacgac
aagggctggcgtatacgtactgaattcaaacaataccaggtattgaagcaaaatccattc
tggtggacgcatcagcgtcacgatggtaaattatggaatctgaacaactaccggacagat
atgattcaagcccttggtggagttgaaggaattctggaacacacattattcaagggaaca
tacttccctacgtgggaaggtttgttctgggaaaaggcctctggattcgaggaatccatg
aaatacaagaagctgaccaacgcccaacgttccggtttgaaccagattccgaatcgtcgt
ttcacactttggtggtcgccgactattaaccgtgccaacgtgtacgtcggtttccaggtg
caactggatttaactggtattttcatgcatggaaagatcccaactttgaagatatcgctc
atccagatattcagagctcacttgtggcagaaggttcacgaatctattgtcatggacttg
tgtcaggtgttcgatcaagaactagatgctttggaaatagagacagtacaaaaggaaacc
attcacccgaggaaatcatataagatgaactcatcctgtgctgacatacttctgttctct
gcatacaagtggaatgtatcgaggccatcgcttctagcagataccaaggacacaatggac
aacacaacaactcaaaagtactggttggacatacaactccgttggggtgattacgactcc
cacgacattgagcgttacgcacgagccaagttcctcgactacactacggataacatgtca
atttatccctcacctactggtctgctaattgccattgatttggcctataatctccacagt
gcatatggcaactggttccccggctgcaagcccctcatacaacaggccatggcgaagata
atgaaagcaaatcccgctctttatgtgctaagggagagaataaggaaagctctgcagtta
tactcttcagagccaacggagccatacctctccagtcagaactatggagagctgttctct
aaccaaattatttggttcgtggatgacacaaatgtataccgtgtgaccattcacaagact
ttcgaaggcaacctgaccacgaaaccaataaacggcgccatcttcatcttcaacccgcgc
acgggacagctcttcctcaagattattcacactagtgtatgggctggacaaaaacgtctc
ggacagctcgctaaatggaagactgctgaagaagtagctgctttgattcgttccctaccc
gttgaagaacaacctaaacagatcattgtcacaagaaagggaatgttggatccactcgag
gtccacttgcttgatttccccaacattgtgataaagggttccgagctccaactaccattc
caagcgtgtctaaaagtggagaaattcggtgatctcatcctcaaagccactgaaccgcaa
atggtcttgttcaacttgtatgacgattggcttaagacgatatcttcttacactgccttc
agtcgtctcatcctcatcctacgagcgttgcacgtaaacactgaacgtacaaaagtcctc
ctaaaaccagacaaaacaacgctgacggagcctcatcacatttggcctacgctttctgac
gatgactggatcaaggtggaagttcagctcaaagaccttattctggccgattatggaaag
aaaaacaacgttaatgtggcatcgctcacccaatcggagatccgtgacatcattctcggt
atggagatatcggcgccctctgcccaacggcaacagatagcagagatagagaagcagagc
aaggagcagagtcagctcactgccactaccacacgcacggttaataagcacggagatgag
atcataacttctaccaccagcaactacgagtcgcagaccttcagttcgaagacggaatgg
cgtgtgcgtgcgatatcggctacaaacctgcatctacgtacaaaccatatctacgtgagc
tctgatgacattaaggaaagtggttacacttacatcttaccaaagaacctgcttaaaaaa
ttcgtcactatctccgatttgagagctcagatcgcctgctatctctatggtacatctccc
cccgataatccacaagtacgcgaagtccactgtgcggtacttccaccgcaatggggtact
caccagacggtgcatcttcctaaacacttgcccaaacatccggcgcttgcgcacttacaa
ccattgggatggatgcatacacaacctaacgaattgccacagttgtcgccacaggacata
acagcacacgccaaggtaatggctgacaatcaaacgtgggacggtgagaagaccatcata
atcacgtgttcgtttacacctggatcgtgttcgctaacagcgtataaattgacacctagc
ggatacgaatggggggtcaagaatactgacaggggaaataaccccaaaggttatttgcca
agtcattatgaaaaagttcaaatgttgctgtcggacagattcctcggatacttcatggtg
ccatcacaaggcagttggaattataacttcatgggtgtccgtcacgatcccaacatgaaa
tacggcgtacaacttggcaatccacgtgaattctatcacgaagtacaccgaccggctcat
tttatgaacttcgcggcgatggaagatgccactgcaccgacaatagcggctgatagggag
gaccactatgcttaa
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integrated database retrieval system
