Pieris brassicae (large cabbage white): 123710084
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Entry
123710084 CDS
T08632
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123710084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbx03041
]
123710084
03009 Ribosome biogenesis [BR:
pbx03009
]
123710084
Enzymes [BR:
pbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123710084
Spliceosome [BR:
pbx03041
]
Complex A
U1 snRNP components
U1 related factors
123710084
Complex B
123710084
Ribosome biogenesis [BR:
pbx03009
]
Eukaryotic type
Pre-60S particles
Helicases
123710084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SecA_DEAD
AAA_30
DUF2110_N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123710084
NCBI-ProteinID:
XP_045517732
LinkDB
All DBs
Position
5:complement(4583001..4585983)
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AA seq
511 aa
AA seq
DB search
MAHNLARNFLRQNHFSILWCPSVKNFTTFKHIIQSAISCDHAVTKWTSNQNRIYISNRFY
ATNTAQKTDEEYIIENKITIHGEDIPSPFRDIDTCGFPEYIKTLLKEKGITNPTVIQSQG
WPIALAGKNFVGIAQTGTGKTLAYLLPAVVHLKETEGRRGRGPRVLIIAPTRELARQIEE
VAKEFQRSLGIRSLCIYGGVSRSRQAEELKYGVDILIATPGRLNDFIDSKVTNLSRCNYV
VLDEADRMLDMGFEPQIRKALEGVPYERQILMFSATWPKEVKYLAKDYLGKFVQVNVGST
DLTANHNIKQNFYVLEQEQKMDKLKEIMHDISGQGFGKILVFTNTKRFVDNLTLSLRRNK
WPAVGIHGDKSQVQRDVIINKFRSGTTNILVATDVAARGLDVDGITHVINYDFPNTSEDY
IHRIGRTGRSQNKGVSYTFLTTEEGRHAHNIIAVLKEAKQEIPEELEFLARDFSNMKDMN
THMKQKPKPRNYNFRNNRNNRWNKYDRNNYY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggctcataacttagcaagaaattttttgaggcaaaatcatttctcaattctatggtgt
cctagcgtgaagaacttcacaacttttaaacacataattcagtctgcaatatcgtgtgac
catgctgttacaaaatggacttcaaatcaaaatcgaatctacataagtaatagattttat
gcaactaatacagcacagaaaacggatgaagagtacataattgaaaataagataacaatt
catggtgaagatatacccagtccttttcgagatatagatacatgtggatttccagagtac
ataaaaacattgttgaaagagaaaggcattacaaatccaactgtaatacagtctcaaggt
tggccaattgcattggcaggtaaaaattttgtaggcattgcacaaaccggaactggtaaa
acattagcttatctgctaccagcagttgttcatttaaaagaaactgaaggtagacggggt
aggggtccaagagttttaattatagccccaacaagggaactagcccgtcagattgaagaa
gttgcaaaagaatttcaaaggtctttgggaattcgctcgttgtgtatttatggtggtgtc
agccgaagtaggcaggcggaagagttaaagtatggagttgatatattaatagcaacacca
ggacgacttaatgatttcattgatagtaaagttaccaatctgtcaagatgtaactatgtt
gtattggatgaagctgacagaatgttggatatgggttttgagccacaaataagaaaagca
cttgagggggtaccttatgaaagacaaatactaatgttctcagctacatggcctaaagaa
gtcaaatatcttgcaaaagattatttaggaaaatttgttcaagttaatgtgggatcaact
gacttaacagcaaaccataatattaagcagaatttctatgttcttgaacaagaacaaaaa
atggataagctgaaagaaataatgcatgacatatctggtcaaggttttggtaaaattctt
gtatttacaaacactaagaggtttgtagataatttgacactctcattgagaagaaataaa
tggcctgctgtaggtattcatggtgataagtcacaggtacaaagggatgtaataatcaat
aaattcaggagtggtacaaccaatattctggttgcaacagatgtggctgcgagaggatta
gatgttgatggaattacacatgtgatcaactatgatttcccaaatacttcagaagattat
attcaccgaatagggcggactggccgttcacaaaataaaggtgtttcttacacattcctt
acaactgaagaaggacgccatgcccacaacataatagctgtattaaaagaagccaagcag
gaaattccagaggagttagagtttttagcaagagatttcagcaacatgaaagatatgaat
actcatatgaagcaaaaaccaaaaccgaggaattataattttagaaataatagaaataat
cgatggaataagtatgatagaaataattactattaa
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