Pieris brassicae (large cabbage white): 123710172
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Entry
123710172 CDS
T08632
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03022
Basal transcription factors
pbx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123710172
09124 Replication and repair
03420 Nucleotide excision repair
123710172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123710172
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123710172
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123710172
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123710172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
zf-RING_4
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
123710172
NCBI-ProteinID:
XP_045517879
LinkDB
All DBs
Position
5:8081474..8084953
Genome browser
AA seq
400 aa
AA seq
DB search
MADDEQDSKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAARKAVTQRRGPVRLGMM
RHLLVAIDCSEAMSSQDLKPTRFLCTLKLLEKFIEEFFDQNPLSQLGLVTMKNKRAEKIS
ELSGNVRKHIKVVQGLSNMTLTGEPSLQNTLELAGRVLKPLPAHASRELLVLFASLTTCD
PGDISVSVQNLKNEGIRCSVIGLAAEVRICKKLCQDTGGEYGVVLDDVHYRSLLLEQTSP
PPRARALDAGLVKMGFPHSAPPSTQSDTEPPITVCMCHIEEGEGVGGEGHLCPQCRSKYC
SLPAQCRTCGLTLASAPHLARSYHHLFPVDPFEELKNEGQSQFCFACVRSFTDTDKQIYR
CNRCLEHYCWECESMISTTLHVCPGCASRPHLYQRLPDTA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatgaacaagattccaaagaatatagatgggaaacaggttatgaaaaaact
tgggaagcgataaaagaagatgaagatggattggttgaggggcttgtggctgaatttgct
caaaaagcagcgagaaaagccgttactcaacgccgaggaccagttcgactgggtatgatg
aggcatctacttgttgccattgactgttctgaagctatgagctctcaggacttgaaaccg
actagatttctttgcacattaaagttgttggaaaagttcatagaagaattctttgaccag
aatcctttgagtcaactaggcttagttacaatgaaaaataaaagggcagaaaaaatcagt
gagctatcaggaaatgtaaggaaacatattaaggtggtacaaggattgtccaatatgaca
ttaacaggagagccatcactacagaatactttggaactagctggccgagtccttaaacca
ctgcctgcacatgcttcacgggaattattagttttatttgcatcacttacaacatgtgat
cctggtgatataagtgtttctgtacaaaacctgaagaatgaaggaataagatgctctgta
ataggattagctgctgaagttagaatatgcaagaaattgtgccaggacactggtggagaa
tatggtgtggtattagatgacgtccattaccgatctcttctactagaacaaacatcaccg
ccaccgcgcgcgcgggcgctggatgccggtttagtcaaaatgggattcccacactctgct
ccaccctccactcagtctgatacagagccaccaatcactgtctgcatgtgccacattgaa
gaaggtgaaggtgtaggaggtgaaggccatctatgtccacaatgtcgtagcaaatactgt
tcactacctgcacagtgtcggacctgtggcctaacactagcatcagctccacatcttgct
agatcatatcatcatctgtttcctgttgatccatttgaggaattaaaaaatgaaggacaa
agtcaattctgttttgcatgtgtaagatctttcacagatactgataagcagatatatcgg
tgtaaccgttgtttggagcattattgttgggaatgcgagagcatgatatcgacaacccta
cacgtctgccccggatgtgcttcacgccctcacctctatcaacgattaccagatacagct
taa
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