Pieris brassicae (large cabbage white): 123710202
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Entry
123710202 CDS
T08632
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03030
DNA replication
pbx03420
Nucleotide excision repair
pbx03430
Mismatch repair
pbx03440
Homologous recombination
pbx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123710202
03420 Nucleotide excision repair
123710202
03430 Mismatch repair
123710202
03440 Homologous recombination
123710202
03460 Fanconi anemia pathway
123710202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbx03000
]
123710202
03032 DNA replication proteins [BR:
pbx03032
]
123710202
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123710202
Transcription factors [BR:
pbx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123710202
DNA replication proteins [BR:
pbx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123710202
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123710202
MMR (mismatch excision repair)
123710202
DSBR (double strand breaks repair)
HR (homologous recombination)
123710202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
IBR
GDH2_N
Motif
Other DBs
NCBI-GeneID:
123710202
NCBI-ProteinID:
XP_045517915
LinkDB
All DBs
Position
5:8013178..8020950
Genome browser
AA seq
607 aa
AA seq
DB search
MAYNLSEGSLEVIMKGGHYDKPIMQVLGSKKIQGNGSVERFRLLVSDGKHSHSFAILATQ
LNDKLISGELSDYSVVQIDRFVTSILNNEKSEKNGDRRVMIIVAITIIASGSQVGKKLGN
PTTWSEDTAKTSPQALQPVARPTPAPSRPMSSMANSSASTNLDSSMLSSQMTHPITSLSP
YQNKWVIKARVMTKSPIRTWSNAKGEGKLFSLDLCDESGEIRATAFRNECDKFYDMLQVD
KVYYISRCQLKTANKQYTSIKNDYEMTFTADTVVAECMEDTSNMPSVKYEFTPISDIANK
NVDTLLDTIGVCKMASDVQELTARNTGKLLKKREVTLVDPSGGAIALTLWGNEAETFDSS
TNPIVAAKGARLTEFNGSKSLSCLASTVLRMNPDLPEAHKLRGWYDNGGADMDVVNISAR
AGGYTGGSSEWMSFSEAESKQLGSGSKGDYYSLLGVLTFTFSDNALYKACPQEQCNKKLV
DQENGLFRCEKCNREYPNYKYRLLLSANVSDPTGDQRITAFNEAAEAMLGQKAAEIGRLL
EHDKAAYAHIFEDVKFKTFLFKFRTKMEVYSDEARLKTTVMNASPVDYKDANARLIKGIK
ALSGVEI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatacaatttgtcagaaggatcacttgaggtgataatgaaaggcgggcattatgat
aaaccaatcatgcaagtgttaggtagtaaaaagatccaaggtaatggatcagttgaaaga
tttagacttctagtatcagatggcaagcattctcacagttttgccatccttgcaactcag
ctcaatgataaacttatttctggggagttgtctgattattctgttgttcaaattgacaga
tttgttacatctatattaaataatgaaaaaagtgaaaaaaatggcgatagacgtgtcatg
ataattgtggctattacaataatagcatctggaagtcaagttggcaaaaaacttggaaat
ccaacgacatggtctgaagatactgcaaaaacaagtccgcaggcccttcaaccagttgcc
agacccacaccagccccgagtagaccaatgagctctatggcaaattctagtgcctctaca
aatctagatagcagcatgctgagttcgcaaatgacacatcctattacaagtttaagtccc
tatcaaaataaatgggtaatcaaagcccgtgttatgactaaaagccctattcgcacttgg
agcaatgccaagggtgagggaaaactgttcagtttggacctgtgtgatgaaagtggagaa
atacgagcaacagcattccgtaatgagtgtgacaaattctatgatatgctacaagtagat
aaagtatactacataagtcggtgtcaacttaaaacagccaacaagcagtacactagtatc
aaaaatgactatgagatgacgttcacagcagacacagtggttgcggaatgtatggaagat
acctcaaacatgccctctgttaaatatgagttcacaccaatcagcgacatcgctaacaag
aatgttgacacactattggatacaataggagtatgcaagatggcgtctgatgtgcaagaa
ctaactgctcggaatactggcaagttgctgaagaagagagaggtcactcttgtggacccg
tctggaggggcaatagcattgacactctggggtaacgaagcggagacatttgacagcagc
acaaaccccatagtagctgcaaagggagctcgtctgactgaattcaacggaagcaaatct
ctctcatgtctagcaagtacggtgttgcgcatgaaccctgatttaccagaagctcacaag
ttaagaggctggtacgacaatggcggtgctgatatggatgttgtcaacatatctgccaga
gccggtggctacacgggcggtagcagtgaatggatgtcattctccgaagcggaatcgaag
caactaggctccggaagcaaaggggactattattctcttctaggagttctgacattcact
ttctcagacaatgcactgtacaaggcctgcccacaggaacaatgtaataagaaattggtg
gatcaagaaaatggacttttccgatgtgagaagtgcaaccgggagtatcctaattacaag
tatcgtctgctcttatcggcaaacgtgtctgatccgactggtgatcagcggataacagca
ttcaatgaggcagctgaggccatgttgggtcaaaaggcggcggaaatcggccgtcttctt
gaacacgacaaggctgcgtatgcgcatatctttgaagatgtcaagtttaagacgttccta
tttaagttccgtaccaagatggaagtttacagtgatgaagctcgtctaaagacaacagtt
atgaacgcttcgccggtcgattacaaagacgccaacgccagacttattaaaggcatcaaa
gctttgagtggagtcgaaatataa
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