Pieris brassicae (large cabbage white): 123710205
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Entry
123710205 CDS
T08632
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03013
Nucleocytoplasmic transport
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123710205
09122 Translation
03013 Nucleocytoplasmic transport
123710205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123710205
03041 Spliceosome [BR:
pbx03041
]
123710205
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123710205
Spliceosome [BR:
pbx03041
]
Complex C
Other components
EJC/TREX
123710205
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123710205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
DEATH_SH3BP4
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
123710205
NCBI-ProteinID:
XP_045517918
LinkDB
All DBs
Position
5:complement(2154348..2161077)
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AA seq
663 aa
AA seq
DB search
MSEKSSFDELRVKYKDVLSKAFSTNNIDLLDSFSKKANECDRKVAMDQAFRDKLLDLLSE
ASSILENYVNFCIESCRRLMITPTMPVVLLGDIFDALTLNKCEKLFTYVENGVNIWREDL
FFVACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIVSEFNLDNVT
EFGGDISGTLKDALDEEMVVDDDKNKLNIDYNLYCRFWSLQEFFRSPNTCYNKIQWKTFV
AHSGSVLSAFSSYKLEAIELQKSKLNRLKPVNDVEMEESKEQHYFAKFLTNQKLLELQLS
DANFRRCVLIQFLILFQYLTTTVKFKLESQELKSDQSEWVKDTTNLVYKLLGETPPDGKR
FVECVKSILKREEHWNNWKNDGCPEFQKPKPAVQTESIDEVRRVKKRRRPVGDIIKEYET
QSKHFMGNNELTKLWNQCPDNLAACRTKERDFMPSLEYMLSGGTSSGSGGGWGWRALRLL
ARRSPHFFVHTNNPIGRLSDYLDDMVKRISREVAASATANTANGDPSAVEDKKPESQEEE
MTEEQIETDLIKDGDTDIEQVPDSTDVNDEDKPTRTRLTMITDSQLDVLAAKLSDWKKLA
AKLGYKPDEIEFFETENATDEARAKNMLKLWFDDDEDASVENLLYIMEGLELVDACEALR
NAK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaagtagttttgatgaattacgtgttaaatataaggatgtgctgtcgaaa
gcgttttcaacaaataacatcgaccttcttgattcattctcaaagaaggcaaacgaatgc
gatcgaaaagtggctatggaccaagcgttcagagataaacttttagatctactttcagaa
gcctcgagtatactagaaaactacgtgaatttctgcattgaatcatgtagaagactaatg
atcactccaacaatgcctgttgtacttctcggagatatatttgatgccttaactctcaat
aaatgcgaaaaactattcacatacgttgaaaatggcgtaaacatttggcgagaagaccta
ttttttgttgcatgcaaaaataatttattaagaatgtgcaatgatctcttacgtcgatta
tccagatctcaaaatacagtattttgtggaagaattttgttatttttagcaaaatttttc
ccattttctgagagatccggattgaatatagtttcagaatttaatttagataatgtaact
gagtttggtggagatatttctggtacactcaaggatgcattagatgaagaaatggtggta
gatgatgataagaacaaattaaatattgattataacctgtactgcagattttggagttta
caagagttcttccgaagcccaaatacttgctataacaaaatccagtggaaaacatttgtt
gcacattcaggaagtgtgctgtcagcattttcttcatataaattagaagcaatagaactt
cagaagtccaaattaaatagacttaagccagtaaatgatgttgaaatggaagaaagtaaa
gaacagcattactttgcaaaatttctaactaatcagaagcttctagaactccaactatca
gatgcaaactttagaagatgtgtactcatacaatttttaattttattccaatatttaaca
acaacagtgaagtttaaacttgaatctcaagaactaaaatcagatcagtcggaatgggtc
aaggatacaactaatctagtttataaattactcggtgagacaccaccagatgggaagaga
tttgtcgaatgtgtcaaaagtatattaaagcgagaagagcactggaacaattggaaaaat
gatggttgtccagagttccaaaaaccaaagccggcagtacaaactgaatcaattgatgaa
gtaagacgtgtaaagaagcgtcggcgacctgttggggatattatcaaagaatatgaaaca
caaagcaaacattttatgggaaacaatgaattgacaaaattgtggaatcaatgtccggac
aatcttgccgcgtgtcgtactaaagagagagattttatgccttctttggagtatatgtta
tctggtgggactagtagtgggagtggcggtgggtggggctggcgagctttgaggcttttg
gctcgtagatcgccgcatttctttgtacatacaaataatcctattggacggctttccgac
tatttggatgatatggtgaaacgtatatcgcgtgaagttgcagcgagtgcaactgctaac
acggctaatggagacccatctgctgttgaagataagaaaccggaatcgcaagaagaagaa
atgactgaagaacaaattgaaacagaccttattaaggatggagacactgatatagaacag
gtgccagattcaacagacgtgaacgacgaggacaaaccaactagaactcgtctcacaatg
ataacagactcgcaattagacgtattagctgcaaaactctctgactggaagaaattagca
gcaaaacttggctacaaacccgacgaaatagagttctttgagacagagaacgcgacagat
gaagcaagagccaaaaatatgcttaaactgtggtttgatgatgacgaagatgcatctgtg
gagaatttactctatattatggaaggtttagagttggttgacgcttgcgaagccttgaga
aacgctaaatga
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integrated database retrieval system
