Pieris brassicae (large cabbage white): 123710677
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Entry
123710677 CDS
T08632
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
pbx
Pieris brassicae (large cabbage white)
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbx04121
]
123710677
Ubiquitin system [BR:
pbx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
123710677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
123710677
NCBI-ProteinID:
XP_045518699
LinkDB
All DBs
Position
6:3853623..3883744
Genome browser
AA seq
1611 aa
AA seq
DB search
MRIKMAGTSNNNGKAGRSAVPVDVGSPLLDWEEGDHFSFEDSERFEEDSMCSWSSEPESL
CNNWRGWRRPNFPNSFGPRPTKKPTQDKPVSSLSELAAKCVASHIPFELVEHVYPPVPEQ
LQLQIAFWSFPESEDDIRLYSCLANGSAEEFQRGEHLFRDKAVKDVLQIGFHLSATVLLT
MARTQFNVAVTFDRQKISSCNCTCSSSAHWCSHIVAVCLFRIHLPTQVCLRAPVSESLQR
LQRDQLQKFAQYLISELPRQILPTAQKILDELLSAQPNQINTTCGAPDPTAGASAYEYTS
WFLDEKTLHNNINKILVKFCVPTPIVFSDVNYLSTSAPPAAAEWSSLLRPLRGREPEGMW
NLLSIVREMFKRSDRNAIPLLEIITEEVMACEQIIVWWYSTKAALVAWGGGTGGKHGGGG
GNSTAQHACSSLCDEVVVLWRLAALNPGLAPHERDTLHEQFTQWHVKVLDKVAKNRNNHI
NTSHPRHVRTHSHPPYINGISETEVFPGFNPAMEACFLEWDDYPIAGVTYTKDLNPLYHS
PFTIFRHSDKQADSVHQVNSSKAVLNNEMSLSYRLTNPDPSMQGHRTLVHRNSRITVDLA
IAGPSNQACGSGQEAARDAGPSDGNHSSVSSEGFCENEEEMQVSGADGGDTDSQDSSPPI
SSDDAIPPRDDSVSDDECHLYFYDATAARRVAADGSSAINGANSVSGASSSGASWQCGWE
VQFARAEGLHAHGHAREACALGASLARELLARPPALLGTGYGGSAAELRRARRRHAPSPR
LCAASHRTSCLASTTLAKCAFLCTVLAEFSEQHELAFRVGLFALEMARPPASTKALEVKL
NNQESELVSLLKKLPTGAEQLDLAREKAEQLRDGLLRSRGPALLPISLASFLFEVLVLSA
SENKHPARLLTDEVLGFEAAVAALGLKANVSEADHPLLCEGTRRQRGDLALTLLSFYKDD
PVKLARIMNKLLDRDIHQLTKGPMVSMYYSTNPRFNTRSEHHHHHPPANMPVAGPSCNLS
GEMERLSVGEGNGSPPAAPHSHQQHTTHSLPRLKDTRYKGKRQYPSVPNQPSEASSHFMF
ELAKSVLFKAGGSSSTSLFTQTSCAREHHGPHRGLHMAAFQLGLYALGLHNCVSANWLSR
TYSSHVSWITGQAMDIGAPAILFLIDAWEGHLTPPEAAGIADKASSGRDVQTVRAAAELA
LSVLPHAHALNYNEIQRAVLQCKEQSDAMLERACLIVEAAAKGACAGGGVYPEVLYTVAR
YWHELYLRQANEEEPEEAYRAPPPLAVPLPYPLPYPFTYHPYPPHIYRLQFECPQYGGAG
PAHPGAQFAIPQYFVRGIVPPHPQQHPQMAQVAQVAQHVPMPPHAPPHQPIPVNVSHPAP
IPPPLPVAHQPVGAVGVVPVSTAHVNNGPPMGSVPQVPGAGPPALPQAQLRRLLAAYRVG
MLALETQARRVHDDRPQNKFGRNPPYGDHVKWLLRISKRLGAQYLHQFCVCAVNSVVSPF
VLYELCVESAHWLARGGPHHLVMQHLRGTLAPLVHKCQQMYIQCIHQKLYHLTAVEYEEF
VGIVLSARTAFQLTPEGNTQFKEWLASLRRSKSCKKDLWTQLNAALQTNGK
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgcgtataaaaatggcggggacatcaaataataatgggaaagcgggacgatcagctgtc
ccagtggatgtgggatcgcccttacttgattgggaggagggagatcacttcagtttcgaa
gattccgagcgtttcgaagaagattctatgtgtagctggagttcggaacccgaaagcctt
tgtaataattggcgaggctggagaagaccaaattttcccaattctttcggacctaggcca
acgaaaaaaccaactcaagataaacctgtatcatcactaagtgagttggctgctaagtgt
gttgccagtcacattccatttgagttagttgaacatgtgtatccaccagtaccagagcaa
ttacaactacaaattgctttttggagcttcccagagagtgaagatgatatacgtctttat
tcatgccttgcaaatggatcagctgaagagtttcagagaggagaacacctgttcagagac
aaggcggttaaggatgttttacaaattggttttcacttatctgcaacagttttacttacc
atggcaaggactcagtttaatgtagctgtgacatttgacaggcaaaagatatcatcatgt
aactgtacttgttcctcatcagctcattggtgttcacatattgttgctgtgtgtctcttt
agaatacatttaccaactcaagtatgtctcagagcaccagtatcagagtctctacagaga
ttgcagcgagaccaattacagaagtttgcacaatacctcatatcggagttaccacgacaa
attctaccaacggcacagaaaatattggacgagttattatcagctcaaccgaaccaaatc
aacacaacttgcggggcacctgacccaaccgcaggtgcatcggcctatgaatacacatca
tggttcctcgatgaaaaaacattacacaacaatattaataaaatattggtgaaattttgt
gtaccaactccaattgtatttagtgacgtaaattatctaagtacaagcgctccgccggct
gcggctgagtggtcctccttgttgcggcctttgcgcggacgtgagcctgagggcatgtgg
aatttgctgtccattgtaagggagatgttcaaacgtagcgacagaaatgctatacctcta
ctcgagattatcactgaagaggtcatggcttgtgaacagataatagtctggtggtacagc
actaaagcggccttagtggcgtggggtggcgggacgggagggaagcatggtggtggcgga
ggcaactccaccgctcagcacgcttgttcttctctgtgtgacgaggtggtggtgttatgg
cgtctcgcggctttgaaccctggactcgcaccacacgaaagagatacacttcacgagcag
ttcacccaatggcacgtgaaggttttggacaaggtggcaaagaatcgtaacaatcacata
aacacgtcgcatccgcgccatgtgcgtacgcattctcacccgccatatatcaatggtata
agcgagactgaagtatttcccggcttcaacccggctatggaagcctgtttccttgaatgg
gacgattacccaatagctggtgttacatacacaaaggacctcaatccgctctatcatagc
ccttttaccatattcaggcattcggataagcaggcagacagtgtacatcaggtaaattca
tcaaaggcagtacttaacaacgagatgtctctcagctatagactgacgaatcctgatccg
tcaatgcaaggacatcgaactctggttcacagaaacagtagaataactgttgatttggca
attgctggtccttcgaatcaggcttgtggttctggacaggaagcagctcgtgatgccggg
ccaagtgacgggaatcattcgagtgtctcatccgaaggtttttgtgaaaatgaagaagaa
atgcaagttagcggcgctgatggtggtgacactgactctcaggattcatctccaccgatt
tcgtctgatgatgcgattccacccagggatgactcagtctctgatgatgaatgtcatctc
tacttctatgatgctacagccgctagaagagtggcagctgacggatctagcgcaataaac
ggggccaacagtgtgagtggagccagtagcagcggcgctagttggcagtgcggttgggaa
gttcagttcgcgcgagctgaaggcttacacgcgcatggacatgccagagaggcctgcgca
cttggcgccagtcttgccagagagctattggctagaccaccagctttgctaggtacaggc
tacggcggcagcgcagcggagttgcgacgtgctcgtagacgtcacgccccgtccccgcgt
ctttgcgcagccagccatcgcacctcgtgtctcgcttcgacgacgctcgcgaaatgcgct
ttcctttgcactgtgctggcggaatttagcgaacaacacgaattagccttccgtgtgggt
cttttcgcgttggaaatggctcgtcctccggccagtactaaagctctggaagtgaagctg
aacaatcaggagtccgagctggtctccttgctaaagaaactgccgactggtgcagaacaa
ctggacctggctagggagaaggcggaacaactgagagatggattgctaagaagccgcggt
ccagcattgttgccgatatcattggccagtttcctgtttgaagttcttgtgctgtccgcg
tctgaaaacaaacatccagcaagactgctaacagacgaagtactaggcttcgaggcggca
gtggcagccctagggctcaaagcgaacgtgtcggaagcagatcatccgttactatgcgaa
ggcacgagacgacaacgcggtgacctagctctgaccctgctgtctttctacaaggacgat
cccgttaaactcgcccgtattatgaataagctccttgatcgcgatatccaccagctgaca
aagggtccaatggtcagcatgtactactccacgaaccctcgcttcaatactcgcagcgag
catcaccaccatcatcctccagctaatatgcctgtggccggtccgtcgtgtaacctatct
ggtgagatggagcgtctctccgtgggagaagggaatggctcgccccccgcagccccccat
tcacatcagcagcatactacacattccttgcctaggcttaaggataccaggtacaaagga
aagcgacaatatccctcagtgccaaatcagccttcggaagcgtcgtctcacttcatgttc
gaattggccaagtcagtgttattcaaggctggagggtcctcgagtaccagcctcttcact
cagacctcgtgtgccagagagcatcatggacctcatagaggtctacatatggcggctttc
caattgggtctatacgccctcggcctacataactgtgttagcgccaattggctgagtcgt
acgtattcttcgcacgtgagctggataacaggtcaagccatggacattggtgcacccgca
atcctattcttgatcgatgcttgggaaggacatttgacaccgcctgaagcagctggaata
gccgataaggcctcatcaggtcgcgacgtccaaactgttcgggcggcggctgaacttgcc
ttatcagtactaccgcacgcacacgccctcaactacaacgagatccaacgcgcagtactg
cagtgcaaggaacagagcgacgccatgttggaacgggcctgtctcatcgtcgaagccgct
gctaaaggcgcctgcgcaggtggcggggtttaccccgaggtgctgtacacggtggcccgt
tactggcacgagctgtacctgcgccaagccaatgaggaagagcccgaggaggcctatagg
gctccaccaccgctcgccgtgcctctgccctacccgctgccatatcccttcacctaccac
ccttatccgccacacatttatcgtctgcagttcgagtgccctcagtacggtggcgcaggt
ccggctcacccgggcgcccagttcgcgattccgcagtacttcgtgcgcgggatcgtgccg
cctcacccgcagcaacacccgcaaatggctcaagtggcgcaggtggcccagcacgtcccg
atgccgccccacgcgcctcctcaccagcctatacccgtcaatgtgtctcaccccgctccg
ataccgccacctttgcctgtcgcccatcaaccagtgggtgccgtgggagttgtgccagtc
agtactgcacacgtgaataacggtccgcccatgggcagtgtcccacaagtacctggagct
ggtccacccgccttaccgcaagcgcagttgaggagattactcgctgcttatagagttggc
atgcttgcactggaaacccaggccaggagggtccacgatgataggccgcagaataagttc
ggaaggaatcccccatacggcgatcacgtgaaatggcttctgcgtatatcgaaacgtctt
ggtgcgcaatacttacaccagttctgcgtttgcgcagttaactctgtggtatcaccgttc
gtgctatacgagttatgcgttgagtcagcccattggctggctaggggaggccctcatcac
ctcgtaatgcagcatctacggggcacactagcgccactcgtgcacaagtgtcaacagatg
tacattcaatgcatccatcagaagctataccacttaacagcagtcgagtacgaggagttt
gttggtatcgtgttatcagcgcgtacggcttttcaacttacacctgaaggaaacacccag
tttaaggaatggctcgcttccctacgcagatcgaaatcgtgcaagaaggacttgtggacg
cagctgaacgccgcacttcagacgaacggcaaatga
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