Pieris brassicae (large cabbage white): 123711437
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Entry
123711437 CDS
T08632
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03022
Basal transcription factors
pbx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123711437
09124 Replication and repair
03420 Nucleotide excision repair
123711437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123711437
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123711437
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123711437
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123711437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
PPL5
BBL5
Motif
Other DBs
NCBI-GeneID:
123711437
NCBI-ProteinID:
XP_045519983
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All DBs
Position
1:16979499..16988982
Genome browser
AA seq
562 aa
AA seq
DB search
MTTSSEDVLLSVNHVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFHFVNSAGAEAQAKDRDRVKMLLQNLLPKFKRQIDGELEMKSRL
LSLHPILKHLYEDLVISKVINSEEYWNTPTLKHYTESTNLKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHVDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKMDDQAIASAMKHTTLDLTVDLPHFTEPVPLLPDEEYTEKEKDSNSIHRSMI
KRFNQHSIMVLKASHKNSSSSNNKSTNNNKAENGVKEANGIDKRSMDESEPVDKKRRILE
KIKYEDLDDENDTNRAPELKLSKVERYLLGPSSQVTQSTSSSNNPPPLSALSSICQAWSN
GQQCLRPFRVSAAAAVGALGELSPGGALMRQHHAASMAQLIPSDIKLELHRIYYSGGELL
RELWRCFPQPGAGTDTEDHAAKAEKFYEALLRFRNVKLRPFEEKMLRDLTPLATSLTRHM
NQMIDAACSKYALWQQRQAKLR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgactacttcgtcagaagatgtgttgcttagtgttaaccatgtgcgttataaaaagggc
gatgggacactgtatgtaatgaatcaaagactagcctggatgcttgagaatcgagacacc
gttgctgtatctcataaatatgctgatattaaaactcaaaaaatatctcccgctgggaaa
ccaaaggtgcaattacaagtggtattgcatgatggcacttgttcaacttttcatttcgtt
aactctgctggagcagaagcacaggctaaagacagggatcgagttaagatgttgttacag
aatcttcttcctaaatttaagagacaaatagatggagaattagaaatgaaatctaggtta
ttatcattacatcctattttgaagcatttatatgaagacttagttatatcaaaagttatt
aatagtgaagaatactggaataccccaacattaaaacattatacagaatctactaatttg
aagcaagaagctggtgtatctggagcatttctagcagatattcagccacaaacagatggc
tgtaatggtcttaaatacaatctcacacaagatatcatagatgcaatatttaaaacatac
ccggctgtgagaaagaaacatgtagattatgttcctaataaaatgactgaggcagagttt
tggactaagttttttcaatcacattattttcatagggatcgtatagcatcatcatctagt
aaagatctgtttggagagtgtgccaaaatggatgatcaggcgatcgcgtccgcaatgaaa
cataccaccttagatctcacagttgatttaccacactttacagaaccagttcccctttta
cctgatgaggaatacacagaaaaagaaaaggacagtaattccattcatcgcagcatgata
aaacggtttaaccaacactcaattatggtgcttaaagctagtcacaaaaattcaagcagt
agtaacaataaatcaacaaataataacaaagctgaaaacggcgttaaagaggcaaatgga
atagacaagcgatcaatggatgagagtgaacccgtggacaaaaaaaggagaatattagaa
aaaattaaatatgaagacttggacgatgagaacgatactaatcgtgcgccggagttgaaa
ttgtctaaggtcgaacggtatttattaggtccatcttcacaagtaacacaatctacttca
agtagcaataacccaccgccactgtcagcgttgtcgtctatatgtcaggcgtggtcaaac
ggtcagcaatgcctgcgtccgtttcgtgtaagtgctgcggcggcagtaggggctttggga
gaactcagtcccggaggcgcacttatgagacaacaccacgctgcatctatggctcagtta
ataccatcggacattaaattagagttacaccgtatatactactcgggcggggagttactc
cgggaactctggcgatgtttcccacaacccggcgccggcacagatacagaggatcatgcg
gcgaaggccgaaaaattctatgaagcgctactacgctttagaaacgtcaaattgcggcca
tttgaggaaaaaatgcttcgtgaccttacgccactagcgacatctttaacgcgacatatg
aaccaaatgatagacgctgcctgttccaaatacgccctttggcagcagagacaagcgaaa
cttagatag
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