Pieris brassicae (large cabbage white): 123711484
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Entry
123711484 CDS
T08632
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03030
DNA replication
pbx03410
Base excision repair
pbx03420
Nucleotide excision repair
pbx03430
Mismatch repair
pbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123711484
03410 Base excision repair
123711484
03420 Nucleotide excision repair
123711484
03430 Mismatch repair
123711484
03440 Homologous recombination
123711484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbx03032
]
123711484
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123711484
Enzymes [BR:
pbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123711484
DNA replication proteins [BR:
pbx03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
123711484
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
123711484
MMR (mismatch excision repair)
DNA polymerase delta complex
123711484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
123711484
NCBI-ProteinID:
XP_045520048
EnsemblRapid:
ENSPBSG00000007520
LinkDB
All DBs
Position
6:10268503..10280509
Genome browser
AA seq
1096 aa
AA seq
DB search
MREKSYFAVWNTHKMNKRKQFKGPPPKRIKSNDDDEDDIPASFEDQLAGMESDFDSPEIV
GDGPENQNTNIKWSRPSPQDMDPGTTSLIFQQFDIDHYNGKPIPGMPGSQLAPVPIMRMY
GITMQGNSVCCHVHGFTPYFYVTVPLNFDVSSCLELKTNLNKAILEDLRNNKDSIREAVL
EVKIVKAKSIMYYKGDNLIMYAKVSVALPKLIAAAKRLIERQPTSFSLSDPSFYETNIDF
DIRFMVDTSVVGCSWIVLPSKKWSIRSKSGKLPPESRCQIEVDVAWNSFISHQPEGEWSK
VAPVRILSFDIECAGRKGVFPEPEKDPVIQIASMVIRQGETEPYLRNVFTLNTCAPIVGS
QVYSFQSESELLSKWSDFFRELDPDIITGYNISNFDWPYLINRAKHLKVANFEFLGRIQN
IRSVIKDSVLQSRQMGRRENKSINFEGRVPFDLLQVLLRDYKLRSYTLNAVSYHFLQEQK
EDVHHSIITDLQNENEQTRRRLAMYCLKDAYLPIKLLNKLMCIINYMEMARVTGVPLLCL
LTRGQQIKVVSQLLRKAKDAGYLMPAYHGQGSDDQFEGATVIEPKKGYYADPISTLDFAS
LYPSIMMAHNLCYTTLISPNMQKDLNLDPENITITPMNNMFVKSNVRKGLLPEILESLLA
ARKKAKADLKNETDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGR
TMIEFTKTEVEKKYTKANGYKEDAVVIYGDTDSVMVKFGVKTLLESMELGKEAADFVSSK
FVKPIKLEFEKVYYPYLLINKKRYAGLYFTRTDTYDKMDCKGIETVRRDNCPLVSNMMSM
CLQKLLIDRDPDGAVSYAKQIISDLLCNRIDISQLVITKELAKNDYSAKQAHVELANKMK
KRDAGTAPKLGDRVPYIICCAAKNTPAYMKAEDPIFVLENSVPIDFSYYLENQLSKPLLR
IFEPILGEKAESLLLKGEHTRTKAMVTSKVGALAAFTRKKEKCIGCKVVISDDTKALCDH
CLDKEGQLYISEMFKVRHLQEKFSRLWTECQRCQGSLHEEVLCTNRDCTIFYMRKKVGME
LDTQEKRVSRFGEPLW
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaaaagctattttgcagtttggaatacccataaaatgaataaacgaaaacaa
tttaaaggtcctccaccaaaaaggattaaatctaacgatgacgatgaagatgacattcca
gcaagttttgaagaccaactggcaggtatggaaagtgactttgacagtcctgaaatagtt
ggagatgggcctgaaaatcaaaacactaacatcaaatggtcacggccaagtccacaagat
atggatccaggcacaacatcattaatttttcagcagtttgatattgatcattataatgga
aaacctataccaggtatgccaggctcacaactggctcctgtaccaataatgagaatgtat
ggtattactatgcaaggaaattctgtatgttgtcatgtccatggttttactccctacttt
tatgtaactgtacctttaaactttgatgtatcatcttgtttagaacttaagacaaacctc
aataaggctattttagaagacttgcgaaataataaagatagcataagagaagctgtttta
gaggtcaaaatagtaaaagcaaagtctataatgtattataaaggagataatctaataatg
tatgccaaagtgtcagtagcattgcctaaattaatagcagctgcaaaaagactaattgaa
aggcagccaacatcatttagtttaagtgatccttctttttatgaaacaaatatagacttt
gatatccgtttcatggttgatacatcagttgttggttgcagttggattgtgttaccatct
aaaaagtggtcaattagaagtaaatctggtaaattaccacctgaatcccgttgccaaatt
gaagttgatgtggcatggaatagttttatttctcatcaacctgaaggagagtggtctaaa
gttgctcctgtaaggatattaagctttgatattgaatgtgcagggaggaaaggggtcttt
cctgaacctgaaaaagatcctgttattcaaattgcttccatggtaatcagacaaggagaa
actgaaccatacctaaggaatgtatttacattaaatacttgtgcccctatagtcgggtct
caagtttatagcttccaatcagaatcagaactcttgtcaaaatggtcagattttttcaga
gaattagatccagatattataacaggatataacattagtaattttgattggccctactta
ataaatcgcgcaaaacacctcaaagtagcaaattttgaatttttagggcgtatccaaaac
attagatcagtaataaaagattctgtgctacaatctaggcaaatgggtcgaagagaaaat
aaatccattaattttgaaggaagagttccatttgatttacttcaagtacttttaagagat
tataagctaagatcttatacattaaatgctgtaagttaccattttcttcaagaacaaaag
gaggatgtccaccatagtataattacagacttacaaaatgaaaatgaacaaactagaaga
agattagcaatgtattgcttaaaggatgcatatttgccaattaaattacttaataaattg
atgtgtataattaattacatggaaatggctagggttactggtgtaccattattatgtctt
ttaacaagagggcagcaaataaaagttgttagccagctcctacgcaaagctaaagatgct
ggatatttaatgccagcttaccatggtcagggttccgatgatcagtttgaaggagcaact
gtgatagaacctaaaaaaggatattatgcagatcccatatccactttagattttgcatca
ctgtatccaagtataatgatggcacataatttatgttatactaccttaatctctccaaat
atgcaaaaagacttgaatcttgatccagaaaatattacaattacacctatgaataacatg
tttgttaaatctaatgtaagaaaaggtcttctaccggaaattttagagtcacttttggct
gcaagaaaaaaagcaaaagcagatttaaaaaacgaaacagacccttttaaaaggtctgta
ctagatgggcgacagttggcgctaaagataagtgcaaattctgtgtatggatttacaggt
gcacaagttgggaaactaccttgtcttgaaatatcaggaagtgttactgcttatggtcga
actatgatagagtttactaaaaccgaagtagaaaagaagtatactaaagcaaatgggtac
aaggaagatgctgttgttatttatggagacacagattctgtaatggtaaagtttggagta
aaaacattgttagaaagtatggaattgggaaaagaagcagctgattttgtcagttctaaa
tttgtaaagccaattaagttagaattcgaaaaagtctactacccatacctacttatcaat
aaaaaaaggtatgccggtctttattttactaggaccgacacttacgacaaaatggattgt
aagggtatagaaactgtacgcagagataactgccctctagtttcaaatatgatgagcatg
tgccttcaaaaactacttattgatagagatcctgatggagctgtctcgtatgctaagcaa
attatttctgatttactatgtaaccggattgatatatctcaacttgtgatcacaaaagaa
cttgccaaaaatgactattcagcaaaacaagcgcatgtagagttagcaaataaaatgaaa
aaacgagatgcaggcacagcaccaaaacttggagaccgagtgccttatattatatgttgt
gctgcaaaaaatacaccagcttacatgaaagcagaagatcctatatttgtgttagaaaat
agtgtgcccattgactttagttattatttagaaaatcagctatctaagccattattaaga
atttttgaaccaatactaggggaaaaggctgaatcactactgttaaaaggtgaacataca
cgaactaaagcaatggtgacatctaaagttggtgcattagctgcttttacaagaaaaaaa
gaaaaatgtattggatgtaaagtagttatatcagatgatacaaaagccttatgtgatcat
tgcttggataaggaaggccagctttacataagtgaaatgtttaaagttaggcatcttcaa
gaaaagttttcaagactttggacagaatgtcaaagatgccaaggtagtttacatgaagag
gttttgtgcacaaatagagattgtactatattctatatgagaaaaaaagtaggtatggaa
ctggatacacaagaaaaaagagtttcgagatttggtgaacctctttggtaa
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integrated database retrieval system
